seqan-raptor 3.0.1+ds-3 source package in Ubuntu
Changelog
seqan-raptor (3.0.1+ds-3) unstable; urgency=medium
* d/rules,d/tests/*: whoops, more work needed to build & run all the available
tests.
* Add "-O3" to the build-flags, to match "-DCMAKE_BUILD_TYPE=Release".
* d/tests/cwl: save results to $AUTOPKGTEST_ARTIFACTS, use
$AUTOPKGTEST_TMP for temporary files.
-- Michael R. Crusoe <email address hidden> Tue, 22 Aug 2023 13:14:50 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| seqan-raptor_3.0.1+ds-3.dsc | 2.5 KiB | 5b856e39721cb51520316a6fe663abf6f7317a1a61155a133090cc5c6df020f2 |
| seqan-raptor_3.0.1+ds.orig.tar.xz | 2.9 MiB | 3fb5f987f3c0e678d5de41ab3f9f66eae37ba5993edb294caa9e8f2c6132a55d |
| seqan-raptor_3.0.1+ds-3.debian.tar.xz | 8.9 KiB | 8930505204e6d48588bb4d7e79de9422e26685e0f9ddc96e3ee1f8d8da24dbcb |
Available diffs
- diff from 3.0.0+ds-2 to 3.0.1+ds-3 (1.0 MiB)
No changes file available.
Binary packages built by this source
- seqan-raptor: pre-filter for querying very large collections of nucleotide sequences
Raptor is a system for approximately searching many queries such as
next-generation sequencing reads or transcripts in large collections of
nucleotide sequences. Raptor uses winnowing minimizers to define a set of
representative k-mers, an extension of the interleaved Bloom filters (IBFs) as
a set membership data structure and probabilistic thresholding for minimizers.
This approach allows compression and partitioning of the IBF to enable the
effective use of secondary memory.
- seqan-raptor-dbgsym: debug symbols for seqan-raptor
- seqan-raptor-doc: HTML & PDF documentation for seqan-raptor and its APIs
Raptor is a system for approximately searching many queries such as
next-generation sequencing reads or transcripts in large collections of
nucleotide sequences. Raptor uses winnowing minimizers to define a set of
representative k-mers, an extension of the interleaved Bloom filters (IBFs) as
a set membership data structure and probabilistic thresholding for minimizers.
This approach allows compression and partitioning of the IBF to enable the
effective use of secondary memory.
.
This package contains Raptor's docs (HTML & PDF).
