Ubuntu
seqmagick package

seqmagick 0.8.4-1 source package in Ubuntu

Changelog

seqmagick (0.8.4-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.5.1 (routine-update)
  * More verbose autopkgtest and minor fix in case several shell scripts are in
    the same directory in the future.

 -- Étienne Mollier <email address hidden>  Wed, 09 Dec 2020 14:27:08 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Builds

Hirsute: [FULLYBUILT] amd64

Downloads

File Size SHA-256 Checksum
seqmagick_0.8.4-1.dsc 2.0 KiB d655f35f7ba1ef0d65b77061d59914f379822998349471b3fc8055b6c8e3e9b2
seqmagick_0.8.4.orig.tar.gz 652.4 KiB d7c583199bf09f05ea7ea833b4d97bd9cea01436d7320f80c5f6492a016b3b2f
seqmagick_0.8.4-1.debian.tar.xz 4.2 KiB 65083713625225bba9f57682dc844af7941ee3c2697b86173dbcbd7036b798b1

Available diffs

No changes file available.

Binary packages built by this source

seqmagick: imagemagick-like frontend to Biopython SeqIO

 Seqmagick is a little utility to expose the file format conversion
 in BioPython in a convenient way.
 .
 Features include:
 .
  * Modifying sequences:
    - Remove gaps
    - Reverse & reverse complement
    - Trim to a range of residues
    - Change case
    - Sort by length or ID
  * Displaying information about sequence files
  * Subsetting sequence files by:
    - Position
    - ID
    - Deduplication
  * Filtering sequences by quality score
  * Trimming alignments to a region of interest defined by the forward
    and reverse primers