Ubuntu
sibsim4 package

sibsim4 0.20-1 source package in Ubuntu

Changelog

sibsim4 (0.20-1) unstable; urgency=low

  * New upstream version
  * Added myself to uploaders
  * Standards-Version: 3.8.4 (no changes needed)
  * Source-Format: 3.0 (quilt)
  * Debhalper 7
 -- Ubuntu Archive Auto-Sync <email address hidden>   Sun,  09 May 2010 14:02:33 +0100

Upload details

Uploaded by:
Ubuntu Archive Auto-Sync
Uploaded to:
Maverick
Original maintainer:
Debian Med
Architectures:
any
Section:
science
Urgency:
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Precise release universe science

Downloads

File Size SHA-256 Checksum
sibsim4_0.20.orig.tar.gz 31.4 KiB ee02ae5f678d6843cf3ba267140dfccf9648a60d1f01263ae70d405723a35463
sibsim4_0.20-1.debian.tar.gz 2.4 KiB 90aa1415ac46ba921d1a31cdaea5cc4524594b533eeaf1f2729d0d2525126036
sibsim4_0.20-1.dsc 1.3 KiB 4006e0a70b3190c9d49ccf3f9bd50c51a5acca356d5a4dbde1f83323f9b482e7

Available diffs

View changes file

Binary packages built by this source

sibsim4: align expressed RNA sequences on a DNA template

 The SIBsim4 project is based on sim4, which is a program designed to align
 an expressed DNA sequence with a genomic sequence, allowing for introns.
 SIBsim4 is a fairly extensive rewrite of the original code with the following
 goals:
  * speed improvement;
  * allow large, chromosome scale, DNA sequences to be used;
  * provide more detailed output about splice types;
  * provide more detailed output about polyA sites;
  * misc code cleanups and fixes.