Ubuntu
simka package

simka 1.5.3-5 source package in Ubuntu

Changelog

simka (1.5.3-5) unstable; urgency=medium

  [ Steffen Moeller ]
  * Team upload.
  * Fix watchfile to detect new versions on github (routine-update)

  [ Andreas Tille ]
  * Standards-Version: 4.6.0 (routine-update)

 -- Andreas Tille <email address hidden>  Fri, 10 Sep 2021 09:30:45 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 i386 ppc64el s390x hppa ia64 ppc64 riscv64 sparc64 all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Jammy release universe misc

Downloads

File Size SHA-256 Checksum
simka_1.5.3-5.dsc 2.1 KiB baaa608ee7258baf3451f9737b84d97d92ed1497ef4c27ad27041be647aa6c5f
simka_1.5.3.orig.tar.gz 164.2 KiB 545182a28430a8149efd709d9be323683c07ab289c5d0e345b67819f845d0628
simka_1.5.3-5.debian.tar.xz 21.3 KiB 3bf7eb9d10a7e6159bd5c59376c60f7ba3615a7fea85908cce7998a38bc69bf0

Available diffs

No changes file available.

Binary packages built by this source

simka: comparative metagenomics method dedicated to NGS datasets

 Simka is a de novo comparative metagenomics tool. Simka represents each
 dataset as a k-mer spectrum and compute several classical ecological
 distances between them.

simka-dbgsym: No summary available for simka-dbgsym in ubuntu kinetic.

No description available for simka-dbgsym in ubuntu kinetic.

simkamin: approximate comparative metagenomics method dedicated to NGS datasets

 Simka is a de novo comparative metagenomics tool. Simka represents each
 dataset as a k-mer spectrum and compute several classical ecological
 distances between them.
 .
 The difference with Simka stands in the fact that SimkaMin outputs
 approximate (but very similar) results by subsampling the kmer space.
 With this strategy, and with default parameters, SimkaMin is an order
 of magnitude faster, uses 10 times less memory and 70 times less disk
 than Simka.