Ubuntu
sortmerna package

sortmerna 4.3.6-3build2 source package in Ubuntu

Changelog

sortmerna (4.3.6-3build2) noble; urgency=medium

  * No-change rebuild against librocksdb8.9 transition

 -- Simon Chopin <email address hidden>  Fri, 19 Jan 2024 12:31:57 +0100

Upload details

Uploaded by:
Paul Mars
Sponsored by:
Simon Chopin
Uploaded to:
Noble
Original maintainer:
Debian Med
Architectures:
any-amd64 any-i386
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Noble release universe misc

Builds

Noble: [FULLYBUILT] amd64

Downloads

File Size SHA-256 Checksum
sortmerna_4.3.6.orig.tar.gz 29.8 MiB 1ddb7a9f50b63ab5b87c15855a4080949fb0ee0f33ecf0ea8dfb1c1c44cbe9da
sortmerna_4.3.6-3build2.debian.tar.xz 12.0 KiB d8cc923d96b8017a1bf46fdef3baf85a47c893677b56112d05d905663a17c2f8
sortmerna_4.3.6-3build2.dsc 1.9 KiB 834e576ce9ee95628c6daa9382153fab0b7abe19e5b5b4969aa6a808a8ff403f

Available diffs

View changes file

Binary packages built by this source

sortmerna: tool for filtering, mapping and OTU-picking NGS reads

 SortMeRNA is a biological sequence analysis tool for filtering, mapping and
 OTU-picking NGS reads. The core algorithm is based on approximate seeds and
 allows for fast and sensitive analyses of nucleotide sequences. The main
 application of SortMeRNA is filtering rRNA from metatranscriptomic data.
 Additional applications include OTU-picking and taxonomy assignation available
 through QIIME v1.9+ (http://qiime.org - v1.9.0-rc1).
 SortMeRNA takes as input a file of reads (fasta or fastq format) and one or
 multiple rRNA database file(s), and sorts apart rRNA and rejected reads into
 two files specified by the user. Optionally, it can provide high quality local
 alignments of rRNA reads against the rRNA database. SortMeRNA works with
 Illumina, 454, Ion Torrent and PacBio data, and can produce SAM and
 BLAST-like alignments.

sortmerna-dbgsym: debug symbols for sortmerna