Ubuntu
spaln package

spaln 2.4.13f+dfsg-1 source package in Ubuntu

Changelog

spaln (2.4.13f+dfsg-1) unstable; urgency=medium

  * Team upload.
  * Ignore i386 in Salsa CI
  * Add CPPFLAGS for hardening

 -- Andreas Tille <email address hidden>  Sun, 05 Feb 2023 21:42:42 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 mips64el ppc64el s390x alpha ia64 kfreebsd-amd64 ppc64 riscv64 sparc64 all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Noble release universe misc
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
spaln_2.4.13f+dfsg-1.dsc 2.2 KiB f2cdb305638b2bd22ee22e47498a3109a733238dfb8dae8450910ce50f3dcc7f
spaln_2.4.13f+dfsg.orig.tar.xz 18.8 MiB 68fa7af1b32e9deee7a73d7e18a8772903f2668684c521cbed4201c509adeeb6
spaln_2.4.13f+dfsg-1.debian.tar.xz 13.3 KiB 8a06b3c82424874c50192392214a42144ebe55407bd94946b87fd5138b3d47e6

Available diffs

No changes file available.

Binary packages built by this source

spaln: splicing-aware transcript-alignment to genomic DNA

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.

spaln-data: splicing-aware transcript-alignment to genomic DNA (data)

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.
 .
 This package contains the architecture independent data files.

spaln-dbgsym: debug symbols for spaln