Ubuntu
spaln package

spaln 3.0.2+dfsg-2 source package in Ubuntu

Changelog

spaln (3.0.2+dfsg-2) unstable; urgency=medium

  * Team upload.
  * Fix portability for arm64
    Closes: #1063798

 -- Andreas Tille <email address hidden>  Mon, 12 Feb 2024 21:36:55 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 loong64 mips64el ppc64el s390x alpha ia64 kfreebsd-amd64 ppc64 riscv64 sparc64 all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Noble proposed universe misc

Downloads

File Size SHA-256 Checksum
spaln_3.0.2+dfsg-2.dsc 2.2 KiB d94e703ce55d9925c6e1dfd68058309d6da96d6fe63dadca766989e1b0111485
spaln_3.0.2+dfsg.orig.tar.xz 18.9 MiB 323d16a645b8c1194a81e20aa073482dd2d9099cd7d07c521cab452261d81166
spaln_3.0.2+dfsg-2.debian.tar.xz 6.0 KiB 1ad652d39ebf50ceba8b6ab1c4e475357d4dec95114c36a8a3df37e2252f31fb

Available diffs

No changes file available.

Binary packages built by this source

spaln: splicing-aware transcript-alignment to genomic DNA

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.

spaln-data: splicing-aware transcript-alignment to genomic DNA (data)

 Spaln (space-efficient spliced alignment) is a stand-alone program that
 maps and aligns a set of cDNA or protein sequences onto a whole genomic
 sequence in a single job. It also performs spliced or ordinary alignment
 after rapid similarity search against a protein sequence database,
 if a genomic segment or an amino acid sequence is given as a query.
 .
 spaln supports a combination of protein sequence database and a
 given genomic segment and performs rapid similarity searches and
 (semi-)global alignments of a set of protein sequence queries against
 a protein sequence database. Spaln adopts multi-phase heuristics that
 makes it possible to perform the job on a conventional personal computer.
 .
 This package contains the architecture independent data files.

spaln-dbgsym: debug symbols for spaln