Change log for staden-io-lib package in Ubuntu

staden-io-lib (1.15.0-1.1build2) noble; urgency=medium

  * No-change rebuild for CVE-2024-3094

 -- William Grant <email address hidden>  Mon, 01 Apr 2024 15:53:42 +1100

Available diffs

• diff from 1.15.0-1.1build1 to 1.15.0-1.1build2 (330 bytes)

staden-io-lib (1.15.0-1.1build1) noble; urgency=medium

  * No-change rebuild against libcurl3t64-gnutls

 -- Steve Langasek <email address hidden>  Sat, 16 Mar 2024 07:25:48 +0000

Available diffs

• diff from 1.15.0-1 (in Debian) to 1.15.0-1.1build1 (7.8 KiB)
• diff from 1.15.0-1.1 (in Debian) to 1.15.0-1.1build1 (525 bytes)

staden-io-lib (1.15.0-1.1) unstable; urgency=medium

  * Non-maintainer upload.
  * Rename libraries for 64-bit time_t transition.  Closes: #1063189

 -- Benjamin Drung <email address hidden>  Fri, 01 Mar 2024 12:46:06 +0000

Available diffs

• diff from 1.15.0-1 to 1.15.0-1.1 (7.5 KiB)

staden-io-lib (1.15.0-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)
  * d/*lintian-overrides: fix mismatched override.
  * typo.patch: fix typo caught by lintian.

 -- Étienne Mollier <email address hidden>  Sat, 20 Jan 2024 20:35:25 +0100

Available diffs

• diff from 1.14.15-1 to 1.15.0-1 (7.4 KiB)

staden-io-lib (1.14.15-1) unstable; urgency=medium

  * New upstream version (bugfix release needed for salmon)
  * Patch applied in previous package was included upstream

 -- Andreas Tille <email address hidden>  Tue, 14 Mar 2023 07:41:05 +0100

Available diffs

• diff from 1.14.14+dfsg-3 to 1.14.15-1 (918.0 KiB)

staden-io-lib (1.14.14+dfsg-3) unstable; urgency=medium

  * Fix watch file
  * Set upstream metadata fields: Bug-Submit.

 -- Andreas Tille <email address hidden>  Sun, 27 Nov 2022 07:02:30 +0100

Available diffs

• diff from 1.14.14+dfsg-1 to 1.14.14+dfsg-3 (1.8 KiB)
• diff from 1.14.14+dfsg-2 to 1.14.14+dfsg-3 (909 bytes)

staden-io-lib (1.14.14+dfsg-2) unstable; urgency=medium

  * Work around missing declaration of encode_names in libhtscodecs2
    version 1.3.0
    Closes: #1022282
  * Standards-Version: 4.6.1 (routine-update)
  * Set upstream metadata fields: Archive.

 -- Andreas Tille <email address hidden>  Fri, 28 Oct 2022 07:19:58 +0200

staden-io-lib (1.14.14+dfsg-1) unstable; urgency=medium

  * Fix watchfile to detect new versions on github
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)
  * Remove trailing whitespace in debian/changelog (routine-update)
  * Build-Depends: libbz2-dev, liblzma-dev
  * Exclude compiled executable htscodecs/tests/varint

 -- Andreas Tille <email address hidden>  Wed, 06 Oct 2021 21:49:12 +0200

Available diffs

• diff from 1.14.13-4 to 1.14.14+dfsg-1 (924.5 KiB)

staden-io-lib (1.14.13-4) unstable; urgency=medium

  * Fix build for 32 bit systems courtesy a patch from upstream. Updated
    symbols file to match.
  * REALLY install io_lib_config.h to /usr/include/io_lib/

 -- Michael R. Crusoe <email address hidden>  Tue, 28 Jul 2020 12:42:20 +0200

Available diffs

• diff from 1.14.12-2 to 1.14.13-4 (36.7 KiB)
• diff from 1.14.13-3 to 1.14.13-4 (3.6 KiB)

staden-io-lib (1.14.13-3) unstable; urgency=medium

  * Install io_lib_config.h to /usr/include/io_lib/
  * Add new symbols to debian/libstaden-read14.symbols

 -- Michael R. Crusoe <email address hidden>  Sun, 19 Jul 2020 17:25:41 +0200

Available diffs

• diff from 1.14.13-2 to 1.14.13-3 (1.5 KiB)

staden-io-lib (1.14.13-2) unstable; urgency=medium

  * Don't run dh_missing in for arch independent builds. 

 -- Michael R. Crusoe <email address hidden>  Thu, 16 Jul 2020 13:49:13 +0200

Available diffs

• diff from 1.14.12-2 to 1.14.13-2 (33.1 KiB)

staden-io-lib (1.14.12-2) unstable; urgency=medium

  * File more spelling typos
  * Install upstream's manual pages
  * include symbols in the package
  * debian/control: fix typo in the package descriptions
  * debian/rules: add hack to autoconf not forget MMAP with cross
    building
  * debian/patches/s390x: applied patch from upstream to fix big endian builds
  * debian/patches/usedebianhtscodecs.patch: added DEP-3 patch metadata
  * debian/upstream/metadata: added repository & bug entries

 -- Michael R. Crusoe <email address hidden>  Thu, 21 May 2020 13:13:22 +0200

Available diffs

• diff from 1.14.11-6 to 1.14.12-2 (149.4 KiB)
• diff from 1.14.12-1 to 1.14.12-2 (6.8 KiB)

staden-io-lib (1.14.12-1) unstable; urgency=medium

  * Team upload.

  [ Michael Crusoe ]
  * New upstream version
  * Standards-Version: 4.5.0 (routine-update)
  * debhelper-compat 12 (routine-update)
  * Remove many patches incorporated upstream
  * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)

  [ Steffen Moeller ]
  * Fixed FTBFS - added dep on libhtscodecs-dev now distributed
    as a git submodule of staden-io-lib.
  * Rules-Requires-Root: no
  * Adjusted library package name to updated soversion 14
  * Added extra argument to d-shlibmove to override search for
    unversioned libhtscodecs-dev package

 -- Michael R. Crusoe <email address hidden>  Mon, 10 Feb 2020 10:51:13 +0100

staden-io-lib (1.14.11-6) unstable; urgency=medium

  * Switch to -O0 on armhf, mips. Closes: #916262
  * Standards-Version: 4.3.0
  * debian/control: mark staden-io-lib-examples as Multi-Arch: foreign
  * changelog & debian/patches/spelling: typo fix (independent)

 -- Michael R. Crusoe <email address hidden>  Wed, 02 Jan 2019 03:08:23 -0800

Available diffs

• diff from 1.14.11-5 to 1.14.11-6 (2.5 KiB)

staden-io-lib (1.14.11-5) unstable; urgency=medium

  * Fix hash table HASH_INT_KEYS on 32-bit platforms (thanks to
    upstream Rob Davies)
  * Do not attempt to run test suite for architecture independant
    build.
  * Use serial tests

 -- Andreas Tille <email address hidden>  Fri, 07 Dec 2018 12:55:44 +0100

Available diffs

• diff from 1.14.9-4 to 1.14.11-5 (1.4 MiB)
• diff from 1.14.11-4 to 1.14.11-5 (1.8 KiB)

staden-io-lib (1.14.11-4) unstable; urgency=medium

  * Apply three patches from upstream to fix bugs on several
    architectures (thanks a lot for the support by James Bonfield)
    Closes: #915450, #915459, #915460

 -- Andreas Tille <email address hidden>  Fri, 07 Dec 2018 07:56:28 +0100

Available diffs

• diff from 1.14.11-3 to 1.14.11-4 (2.7 KiB)

staden-io-lib (1.14.11-3) unstable; urgency=medium

  * Remove bashism in test script
    Closes: #915460

 -- Andreas Tille <email address hidden>  Tue, 04 Dec 2018 19:35:00 +0100

Available diffs

• diff from 1.14.11-2 to 1.14.11-3 (761 bytes)

staden-io-lib (1.14.11-2) unstable; urgency=medium

  * Fix build on non-x86 architectures (thanks to James Bonfield
    <email address hidden>)
    Closes: #912451
  * Remove trailing whitespace in debian/changelog
  * Remove trailing whitespace in debian/copyright

 -- Andreas Tille <email address hidden>  Sun, 02 Dec 2018 08:50:21 +0100

Available diffs

• diff from 1.14.11-1 to 1.14.11-2 (1.8 KiB)

staden-io-lib (1.14.11-1) unstable; urgency=medium

  * New upstream version featuring SOVERSION bump
  * Fix installation of docs
    Closes: #912272
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.2.1

 -- Andreas Tille <email address hidden>  Mon, 29 Oct 2018 20:24:24 +0100

staden-io-lib (1.14.9-4) unstable; urgency=medium

  * Standards-Version: 4.1.2
  * Really fix fseeko()
    Closes: #876840

 -- Andreas Tille <email address hidden>  Fri, 08 Dec 2017 08:32:32 +0100

Available diffs

• diff from 1.14.8-2 to 1.14.9-4 (613.3 KiB)
• diff from 1.14.9-3 to 1.14.9-4 (883 bytes)

staden-io-lib (1.14.9-3) unstable; urgency=medium

  * Fix FTBFS on big endian: error: invalid operands to binary
    (Thanks to James Bonfield and Christian Seiler)
    Closes: #876839
  * Upstream moved to Github
  * Attempt to fix FTBFS on non-i386 32bit for fseeko()
    Related to bug #876840

 -- Andreas Tille <email address hidden>  Thu, 28 Sep 2017 16:28:30 +0200

staden-io-lib (1.14.8-2) unstable; urgency=medium

  * make sure io_lib-config --libs will not return -pie (see #825461)

 -- Andreas Tille <email address hidden>  Fri, 27 May 2016 16:07:11 +0200

Available diffs

• diff from 1.14.8-1 to 1.14.8-2 (872 bytes)

staden-io-lib (1.14.8-1) unstable; urgency=medium

  * New upstream version
  * cme fix dpkg-control
  * Better hardening

 -- Andreas Tille <email address hidden>  Thu, 19 May 2016 00:38:22 +0200

Available diffs

• diff from 1.14.7-1 to 1.14.8-1 (71.7 KiB)

staden-io-lib (1.14.7-1) unstable; urgency=medium

  * New upstream version
  * Add lintian-overrides for scripts in example package
  * Assemble debian created manpages in debian/man1
  * Add new manpage
  * cme fix dpkg-control

 -- Andreas Tille <email address hidden>  Sun, 21 Feb 2016 09:14:45 +0100

Available diffs

• diff from 1.14.6-2 to 1.14.7-1 (86.3 KiB)

staden-io-lib (1.14.6-2) unstable; urgency=medium

  * Enable separate building of arch independet packages
    Closes: #806112
  * Adapt to latest d-shlibs

 -- Andreas Tille <email address hidden>  Tue, 24 Nov 2015 20:15:14 +0100

Available diffs

• diff from 1.14.0-1 to 1.14.6-2 (54.3 KiB)
• diff from 1.14.6-1 to 1.14.6-2 (938 bytes)

staden-io-lib (1.14.6-1) unstable; urgency=medium

  * New upstream version
    Closes: #793514

 -- Andreas Tille <email address hidden>  Sun, 08 Nov 2015 18:50:19 +0100

Available diffs

• diff from 1.14.3-1 to 1.14.6-1 (25.9 KiB)

staden-io-lib (1.14.3-1) unstable; urgency=medium

  * New upstream release. 

 -- Charles Plessy <email address hidden>  Thu, 01 Oct 2015 22:13:09 +0900

staden-io-lib (1.14.0-1) unstable; urgency=medium

  * New upstream version
  * Deactivated libstaden-read1.symbols for the moment by renaming
    it to libstaden-read1.symbols_old (feel free to maintain this file
    but in this form the package does not build)
  * d/copyright: remove paragraph about not existing file

 -- Andreas Tille <email address hidden>  Mon, 27 Jul 2015 12:46:23 +0200

Available diffs

• diff from 1.13.10-1 to 1.14.0-1 (81.0 KiB)

staden-io-lib (1.13.10-1) unstable; urgency=medium

  [ Andreas Tille ]
  * New upstream version
  * cme fix dpkg-control

  [ Charles Plessy ]
  * Multi-Arch: same. 
  * Unfuzzy debian/patches/pathmax.patch.
  * Update symbols file.

 -- Andreas Tille <email address hidden>  Sun, 05 Jul 2015 16:34:13 +0200

Available diffs

• diff from 1.13.7-1 to 1.13.10-1 (798.8 KiB)

staden-io-lib (1.13.7-1) unstable; urgency=medium


  * New upstream release. 
  * Removed debian/patches/fix-bam-read.patch, applied upstream.
  * debian/libstaden-read1.symbols: updated.  Some symbols are missing but
    it is in area of code that are considered beta (in my understanding).

 -- Charles Plessy <email address hidden>  Fri, 20 Jun 2014 08:04:00 +0900

Available diffs

• diff from 1.13.5-3 to 1.13.7-1 (66.3 KiB)

staden-io-lib (1.13.5-3) unstable; urgency=medium


  * debian/rules: fix permissions in arch=all package only when
    it is really built
    Closes: #745692

 -- Andreas Tille <email address hidden>  Thu, 24 Apr 2014 08:16:30 +0200

Available diffs

• diff from 1.13.5-1.1 to 1.13.5-3 (2.0 KiB)

staden-io-lib (1.13.5-1.1) unstable; urgency=medium


  * Non-maintainer upload.
  * Fix io_lib/bam.c read
    Patch by Aleksandar Zlicic
    Add fix-bam-read.patch
    Closes: #736565

 -- Anibal Monsalve Salazar <email address hidden>  Tue, 01 Apr 2014 04:19:52 +0100

Available diffs

• diff from 1.13.2-3ubuntu1 (in Ubuntu) to 1.13.5-1.1 (252.8 KiB)
• diff from 1.13.3-2 to 1.13.5-1.1 (46.7 KiB)

staden-io-lib (1.13.3-2) unstable; urgency=medium


  * debian/patches/fix_bufferoverflow.patch: Fix buffer overflow
    Thanks to James Bonfield <email address hidden> (upstream) for the patch.
    Closes: #729276

 -- Andreas Tille <email address hidden>  Thu, 12 Dec 2013 13:42:21 +0100

Available diffs

• diff from 1.13.3-1 to 1.13.3-2 (1.7 KiB)

staden-io-lib (1.13.3-1) unstable; urgency=low


  * New upstream release.  Closes: #715753, #715877, #715878, #715879, #715953.

  [ Adam Conrad ]
  * Use dh_autotools-dev to update config.{sub,guess} for new ports.

  [ Charles Plessy ]
  * Updated symbols file: some symbols have been removed, but they relate
    to obsolete code that is not expected to be used.
  * Conforms to Policy 3.5.9.

 -- Charles Plessy <email address hidden>  Sat, 30 Nov 2013 18:11:11 +0900

Available diffs

• diff from 1.13.2-3ubuntu1 (in Ubuntu) to 1.13.3-1 (213.1 KiB)

staden-io-lib (1.13.2-3ubuntu1) trusty; urgency=low

  * Use dh_autotools-dev to update config.{sub,guess} for new ports.
 -- Adam Conrad <email address hidden>   Wed, 23 Oct 2013 12:27:28 -0600

Available diffs

• diff from 1.12.4-1build1 to 1.13.2-3ubuntu1 (1.3 MiB)
• diff from 1.13.2-3 (in Debian) to 1.13.2-3ubuntu1 (713 bytes)

staden-io-lib (1.13.2-3) unstable; urgency=low

 
  * debian/patches: add patch to build on hurd_i386
  * no need to remove package from mips anymore (Closes: #726875)

 -- Thorsten Alteholz <email address hidden>  Mon, 21 Oct 2013 18:10:59 +0200

Available diffs

• diff from 1.13.2-2 to 1.13.2-3 (1.2 KiB)

staden-io-lib (1.13.2-2) unstable; urgency=low


  * Restore and update symbols file debian/libstaden-read1.symbols.

 -- Charles Plessy <email address hidden>  Sat, 10 Aug 2013 12:10:59 +0900

staden-io-lib (1.12.4-1build1) precise; urgency=low

  * No-change rebuild to drop spurious libsfgcc1 dependency on armhf.
 -- Adam Conrad <adconrad@0c3.net>   Fri, 02 Dec 2011 21:24:13 -0700

Available diffs

• diff from 1.12.4-1 to 1.12.4-1build1 (333 bytes)

staden-io-lib (1.12.4-1) unstable; urgency=low

  * New upstream release, with changes on endianness detection
    (closes: #579239).
  * Build on all architectures, (debian/control).
  * Added library symbols file (debian/libstaden-read1.symbols).
  * Incremented Standards-Version to reflect conformance with Policy 3.9.1
    (debian/control, no changes needed).
  * Moved io_lib-config from staden-io-lib-utils to libstaden-read-dev
    (debian/rules, debian/control).
 -- Ubuntu Archive Auto-Sync <email address hidden>   Fri,  15 Oct 2010 10:01:10 +0000

Available diffs

• diff from 1.12.2-2 to 1.12.4-1 (129.2 KiB)

staden-io-lib (1.12.2-2) unstable; urgency=low

  * Restrict staden-io-lib to i386 and amd64 platforms, which are the
    only ones where it is known to work and be used (debian/control).
  * Provide a patch for helping people interested in building this
    package on other architectures (debian/endianness.patch).
  * Incremented Standards-Version to reflect conformance with Policy 3.8.4
    (debian/control, no changes needed).
 -- Ubuntu Archive Auto-Sync <email address hidden>   Mon,  24 May 2010 10:50:05 +0100

Available diffs

• diff from 1.12.2-1 to 1.12.2-2 (1.9 KiB)

staden-io-lib (1.12.2-1) unstable; urgency=low

  * New upstream release: extra options in srf2fastq and API changes in
    HashTable code.
  * Removed the libtool ‘.la’ library (debian/staden-read-dev.install). 
  * Incremented Standards-Version to reflect conformance with Policy 3.8.3
    (no changes needed).
 -- Ubuntu Archive Auto-Sync <email address hidden>   Tue,  02 Feb 2010 00:01:08 +0000

Available diffs

• diff from 1.12.1-1 to 1.12.2-1 (14.3 KiB)

staden-io-lib (1.12.1-1) unstable; urgency=low

  * Initial release (Closes: #530753)
 -- Ubuntu Archive Auto-Sync <email address hidden>   Thu,  19 Nov 2009 23:25:15 +0000