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t-coffee package

t-coffee 13.45.0.4846264+dfsg-1 source package in Ubuntu

Changelog

t-coffee (13.45.0.4846264+dfsg-1) unstable; urgency=medium

  * New upstream version
  * debhelper-compat 13 (routine-update)
  * Standards-Version: 4.6.1 (routine-update)
  * Remove trailing whitespace in debian/changelog (routine-update)
  * Use secure URI in Homepage field.
  * lintian-overrides for html files
  * Force -O0 to avoid crash in test suite

 -- Andreas Tille <email address hidden>  Wed, 12 Oct 2022 12:12:17 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

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File Size SHA-256 Checksum
t-coffee_13.45.0.4846264+dfsg-1.dsc 2.1 KiB f80b8c64e7c9ce37f21919a4894cb2d2180e25cc7532c319c71bc24b039f495b
t-coffee_13.45.0.4846264+dfsg.orig.tar.xz 3.2 MiB 4c81500dbeb9425284ba0a037918676a39dfb2b97b7393327f0a6e4fdb837d1c
t-coffee_13.45.0.4846264+dfsg-1.debian.tar.xz 17.4 KiB 2e9231072998df97faef14923f078634597fc821a4b084ae2875bb9e651bc913

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Binary packages built by this source

t-coffee: Multiple Sequence Alignment

 T-Coffee is a multiple sequence alignment package. Given a set of
 sequences (Proteins or DNA), T-Coffee generates a multiple sequence
 alignment. Version 2.00 and higher can mix sequences and structures.
 .
 T-Coffee allows the combination of a collection of multiple/pairwise,
 global or local alignments into a single model. It can also
 estimate the level of consistency of each position within the new
 alignment with the rest of the alignments. See the pre-print for more
 information
 .
 T-Coffee has a special called M-Coffee that makes it possible to combine the
 output of many multiple sequence alignment packages. In its published version,
 it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and
 T-Coffee. A special version has been made for Debian, DM-Coffee, that uses
 only free software by replacing Clustal W by Kalign. Using the 8 Methods of
 M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite
 methods if you prefer.

t-coffee-dbgsym: debug symbols for t-coffee
t-coffee-examples: annotated examples for the use of T-Coffee

 To help increasing the proficiency in the use of T-Coffee, this
 package provides examples for input sequences and their proper
 alignment.