yaha 0.1.83-2 source package in Ubuntu


yaha (0.1.83-2) unstable; urgency=medium

  * Team upload.
  * Standards-Version: 4.5.0 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Remove trailing whitespace in debian/copyright (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Trim trailing whitespace.
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,

 -- Andreas Tille <email address hidden>  Mon, 16 Nov 2020 18:46:33 +0100

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Uploaded by:
Debian Med on 2020-11-16
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Hirsute release on 2020-11-17 universe misc


File Size SHA-256 Checksum
yaha_0.1.83-2.dsc 1.9 KiB a6de4b9bead4d21a92ad51743d3e85f2a4de523969f4cec7f58277e609a89d57
yaha_0.1.83.orig.tar.gz 99.5 MiB 76e052cd92630c6e9871412e37e46f18bfbbf7fc5dd2f345b3b9a73eb74939ef
yaha_0.1.83-2.debian.tar.xz 4.5 KiB 4864340fe1bb20f7d3745f65dd4d8aefee1c784665dbf7cfb4f5278d52cceee3

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Binary packages built by this source

yaha: find split-read mappings on single-end queries

 yaha is an open source, flexible, sensitive and accurate DNA aligner
 designed for single-end reads. It supports three major modes of
  * The default “Optimal Query Coverage” (-OQC) mode reports the
    best set of alignments that cover the length of each query.
  * Using “Filter By Similarity” (-FBS), along with the best set of
    alignments, yaha will also output alignments that are highly similar
    to an alignment in the best set.
  * Finally, yaha can output all the alignments found for each query.
 The -OQC and -FBS modes are specifically tuned to form split read
 mappings that can be used to accurately identify structural variation
 events (deletions, duplications, insertions or inversions) between the
 subject query and the reference genome.

yaha-dbgsym: debug symbols for yaha