Binary package “phast” in ubuntu bionic
phylogenetic analysis with space/time models
PHAST is a software package for comparative and evolutionary genomics.
It consists of about half a dozen major programs, plus more than a dozen
utilities for manipulating sequence alignments, phylogenetic trees, and
genomic annotations. For the most part, PHAST focuses on two kinds of
applications: the identification of novel functional elements, including
protein-coding exons and evolutionarily conserved sequences; and
statistical phylogenetic modeling, including estimation of model
parameters, detection of signatures of selection, and reconstruction of
ancestral sequences.
.
PHAST does not support phylogeny reconstruction or sequence alignment,
and it is designed for use with DNA sequences only (see Comparison).
Source package
Published versions
- phast 1.4+dfsg-1 in amd64 (Proposed)
- phast 1.4+dfsg-1 in amd64 (Release)
- phast 1.4+dfsg-1 in arm64 (Proposed)
- phast 1.4+dfsg-1 in arm64 (Release)
- phast 1.4+dfsg-1 in armhf (Proposed)
- phast 1.4+dfsg-1 in armhf (Release)
- phast 1.4+dfsg-1 in i386 (Proposed)
- phast 1.4+dfsg-1 in i386 (Release)
- phast 1.4+dfsg-1 in ppc64el (Proposed)
- phast 1.4+dfsg-1 in ppc64el (Release)
- phast 1.4+dfsg-1 in s390x (Proposed)
- phast 1.4+dfsg-1 in s390x (Release)