molphy 2.3b3-3 (sparc binary) in ubuntu feisty

 ProtML is a main program in MOLPHY for inferring evolutionary trees from
 PROTein (amino acid) sequences by using the Maximum Likelihood method.
 Other programs (C language)
  NucML: Maximum Likelihood Inference of Nucleic Acid Phylogeny
  ProtST: Basic Statistics of Protein Sequences
  NucST: Basic Statistics of Nucleic Acid Sequences
  NJdist: Neighbor Joining Phylogeny from Distance Matrix
 Utilities (Perl)
  mollist: get identifiers list molrev: reverse DNA sequences
  molcat: concatenate sequences molcut: get partial sequences
  molmerge: merge sequences nuc2ptn: DNA -> Amino acid
  rminsdel: remove INS/DEL sites molcodon: get specified codon sites
  molinfo: get varied sites mol2mol: MOLPHY format beautifer
  inl2mol: Interleaved -> MOLPHY mol2inl: MOLPHY -> Interleaved
  mol2phy: MOLPHY -> Sequential phy2mol: Sequential -> MOLPHY
  must2mol: MUST -> MOLPHY etc.
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 Homepage: http://www.ism.ac.jp/ismlib/softother.e.html