augustus binary package in Ubuntu Focal amd64

 AUGUSTUS is a software for gene prediction in eukaryotic genomic sequences
 that is based on a generalized hidden Markov model (HMM), a probabilistic
 model of a sequence and its gene structure. After learning gene structures
 from a reference annotation, AUGUSTUS uses the HMM to recognize genes in a new
 sequence and annotates it with the regions of identified genes. External hints,
 e.g. from RNA sequencing, EST or protein alignments etc. can be used to guide
 and improve the gene finding process. The result is the set of most likely gene
 structures that comply with all given user constraints, if such gene
 structures exist.
 AUGUSTUS already includes prebuilt HMMs for many species, as well as scripts
 to train custom models using annotated genomes.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2020-03-27 01:43:20 UTC Published Ubuntu Focal amd64 release universe science Optional 3.3.3+dfsg-2build1
  • Published
  • Copied from ubuntu focal-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Focal amd64 proposed universe science Optional 3.3.3+dfsg-2build1
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to Release

  • Published
  2020-03-27 01:43:39 UTC Superseded Ubuntu Focal amd64 release universe science Optional 3.3.3+dfsg-2
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of augustus 3.3.3+dfsg-2build1 in ubuntu focal PROPOSED
  • Published
  • Copied from ubuntu focal-proposed amd64 in Primary Archive for Ubuntu
  2020-03-28 06:10:09 UTC Deleted Ubuntu Focal amd64 proposed universe science Optional 3.3.3+dfsg-2
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to Release

  • Published
  2019-10-26 20:23:48 UTC Superseded Ubuntu Focal amd64 release universe science Optional 3.3.2+dfsg-2
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of augustus 3.3.3+dfsg-2 in ubuntu focal PROPOSED
  • Published
  • Copied from ubuntu eoan-proposed amd64 in Primary Archive for Ubuntu