concavity 0.1+dfsg.1-4build1 (amd64 binary) in ubuntu focal
ConCavity predicts protein ligand binding sites by combining evolutionary
sequence conservation and 3D structure.
.
ConCavity takes as input a PDB format protein structure and optionally
files that characterize the evolutionary sequence conservation of the chains
in the structure file.
.
The following result files are produced by default:
* Residue ligand binding predictions for each chain (*.scores).
* Residue ligand binding predictions in a PDB format file (residue
scores placed in the temp. factor field, *_residue.pdb).
* Pocket prediction locations in a DX format file (*.dx).
* PyMOL script to visualize the predictions (*.pml).
Details
- Package version:
- 0.1+dfsg.1-4build1
- Status:
- Published
- Component:
- universe
- Priority:
- Extra
Downloadable files
amd64 build of concavity 0.1+dfsg.1-4build1 in ubuntu focal PROPOSED produced
these files:
- concavity_0.1+dfsg.1-4build1_amd64.deb (290.7 KiB)
Package relationships
- Depends on:
- Suggests: