alien-hunter binary package in Ubuntu Focal arm64

 Alien_hunter is an application for the prediction of putative
 Horizontal Gene Transfer (HGT) events with the implementation of
 Interpolated Variable Order Motifs (IVOMs). An IVOM approach
 exploits compositional biases using variable order motif distributions
 and captures more reliably the local composition of a sequence compared
 to fixed-order methods. Optionally the predictions can be parsed into a
 2-state 2nd order Hidden Markov Model (HMM), in a change-point detection
 framework, to optimize the localization of the boundaries of the
 predicted regions. The predictions (embl format) can be automatically
 loaded into Artemis genome viewer freely available at:
 http://www.sanger.ac.uk/Software/Artemis/.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2019-10-18 09:15:30 UTC Published Ubuntu Focal arm64 release universe science Optional 1.7-7
  • Published
  • Copied from ubuntu disco-proposed amd64 in Primary Archive for Ubuntu