gubbins 2.3.4-1 (armhf binary) in ubuntu focal
Gubbins supports rapid phylogenetic analysis of large samples of
recombinant bacterial whole genome sequences.
.
Gubbins (Genealogies Unbiased By recomBinations In Nucleotide
Sequences) is an algorithm that iteratively identifies loci containing
elevated densities of base substitutions while concurrently constructing
a phylogeny based on the putative point mutations outside of these
regions. Simulations demonstrate the algorithm generates highly accurate
reconstructions under realistic models of short-term bacterial
evolution, and can be run in only a few hours on alignments of hundreds
of bacterial genome sequences.
Details
- Package version:
- 2.3.4-1
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
armhf build of gubbins 2.3.4-1 in ubuntu focal RELEASE produced
these files:
- gubbins_2.3.4-1_armhf.deb (38.8 KiB)