python3-edlib binary package in Ubuntu Focal armhf
A lightweight and super fast C/C++ library for sequence alignment using
edit distance.
.
Calculating edit distance of two strings is as simple as:
.
edlibAlign(
Features
.
* Calculates edit distance (Levehnstein distance).
* It can find optimal alignment path (instructions how to transform
first sequence into the second sequence).
* It can find just the start and/or end locations of alignment path -
can be useful when speed is more important than having exact
alignment path.
* Supports multiple alignment methods: global(NW), prefix(SHW) and
infix(HW), each of them useful for different scenarios.
* You can extend character equality definition, enabling you to e.g.
have wildcard characters, to have case insensitive alignment or to
work with degenerate nucleotides.
* It can easily handle small or very large sequences, even when finding
alignment path, while consuming very little memory.
* Super fast thanks to Myers's bit-vector algorithm.
.
This package contains the Python3 module.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2020-02-21 01:08:16 UTC | Published | Ubuntu Focal armhf | release | universe | python | Optional | 1.2.4-2ubuntu1 | ||
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Deleted | Ubuntu Focal armhf | proposed | universe | python | Optional | 1.2.4-2ubuntu1 | |||
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2020-02-20 11:08:49 UTC | Superseded | Ubuntu Focal armhf | proposed | universe | python | Optional | 1.2.4-2build2 | ||
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2020-02-21 01:08:26 UTC | Superseded | Ubuntu Focal armhf | release | universe | python | Optional | 1.2.4-2build1 | ||
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2020-02-22 06:10:10 UTC | Deleted | Ubuntu Focal armhf | proposed | universe | python | Optional | 1.2.4-2build1 | ||
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2019-10-21 00:39:53 UTC | Superseded | Ubuntu Focal armhf | release | universe | python | Optional | 1.2.4-2 | ||
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