Change logs for bedtools source package in Hirsute

  • bedtools (2.30.0+dfsg-1) unstable; urgency=medium
    
      [ Étienne Mollier ]
      * Team upload.
      * New upstream version 2.30.0+dfsg.
      * Refresh 2to3.patch and hardening patch.
      * Remove test related patches, 32-bit-fixes.patch and spelling patch;
        applied upstream.
      * Do not include htsutil as a side test program in bedtools anymore;
        the test tool is inlined as subcommand to reduce memory footprint.
    
      [ John Marshall ]
      * Add htsutil patch to implement the bedtools htsutil subcommand.
    
      [ Étienne Mollier ]
      * d/rules: set $htsutil to use the bedtools htsutil subcommand.
      * d/t/run-unit-test: use the bedtools htsutil subcommand.
    
     -- Étienne Mollier <email address hidden>  Wed, 27 Jan 2021 17:26:26 +0100
  • bedtools (2.29.2+dfsg-6) unstable; urgency=medium
    
      * Team upload.
      * Repair broken link in run-unit-test script; fixes autopkgtest regression.
    
     -- Étienne Mollier <email address hidden>  Sun, 17 Jan 2021 12:11:39 +0100
  • bedtools (2.29.2+dfsg-5) unstable; urgency=medium
    
      * Delete standard debian/gbp.conf
      * Revert deletion of test binary htsutil since it is needed to replace
        samtools that's not working any more for this purpose
      * Move htsutil tool to bedtools package
        Closes: #978679
    
     -- Andreas Tille <email address hidden>  Mon, 04 Jan 2021 13:01:58 +0100
  • bedtools (2.29.2+dfsg-4) unstable; urgency=medium
    
      [ Michael R. Crusoe ]
      * Team upload.
      * Remove the need for samtools via patch from upstream.
      * Include patch from Bernhard Übelacker to fix 32-bit builds. TODO: the
        autopkgtests do not yet pass on i386 (and likely neither on other 32-bit
        archs).
        Closes: #955403
      * debhelper-compat 13 (routine-update)
      * Add salsa-ci file (routine-update)
      * Rules-Requires-Root: no (routine-update)
    
      [ Andreas Tille ]
      * Fix permissions of .sam files
      * Delete test binary to make sure it will not be installed
      * DEP3
      * Standards-Version: 4.5.1 (routine-update)
    
     -- Andreas Tille <email address hidden>  Sun, 20 Dec 2020 19:03:35 +0100
  • bedtools (2.29.2+dfsg-3build2) groovy; urgency=medium
    
      * No-change rebuild because 2.29.2+dfsg-3(build1) was published in Ubuntu
        before.
    
     -- Logan Rosen <email address hidden>  Sat, 09 May 2020 17:12:23 -0400