Binary package “cassiopee” in ubuntu jammy
index and search tool in genomic sequences
Cassiopee index and search library C implementation.
It is a complete rewrite of the ruby Cassiopee gem. It scans an input
genomic sequence (dna/rna/protein) and search for a subsequence with
exact match or allowing substitutions (Hamming distance) and/or
insertion/
.
This package contains the cassiopee and cassiopeeknife tools.