Binary package “damapper” in ubuntu jammy
long read to reference genome mapping tool
Recognised as the Damapper Library, this is a long read to reference
genome mapping command line tool.
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For a given reference database 'X' and read block 'Y', damapper produces
the single file 'Y.X.las'. Each output file is sorted in order of the
A-reads, and if a match is a chain of local alignments, then the LA's in
the chain occur in increasing order of A-coordinates.
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HPC.damapper writes a UNIX shell script to the standard output that maps
every read in blocks <first> to <last> of database <reads> to a
reference sequence <ref>. If <last> is missing then only the single
block <first> is mapped, and if <first> is also missing then all blocks
of the database are mapped.
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This package contains the damapper and HPC.damapper binaries.
Source package
Published versions
- damapper 0.0+git20210330.ab45103-1 in amd64 (Proposed)
- damapper 0.0+git20210330.ab45103-1 in amd64 (Release)
- damapper 0.0+git20210330.ab45103-1 in arm64 (Proposed)
- damapper 0.0+git20210330.ab45103-1 in arm64 (Release)
- damapper 0.0+git20210330.ab45103-1 in armhf (Proposed)
- damapper 0.0+git20210330.ab45103-1 in armhf (Release)
- damapper 0.0+git20210330.ab45103-1 in ppc64el (Proposed)
- damapper 0.0+git20210330.ab45103-1 in ppc64el (Release)
- damapper 0.0+git20210330.ab45103-1 in riscv64 (Proposed)
- damapper 0.0+git20210330.ab45103-1 in riscv64 (Release)
- damapper 0.0+git20210330.ab45103-1 in s390x (Proposed)
- damapper 0.0+git20210330.ab45103-1 in s390x (Release)