Binary package “sambamba” in ubuntu jammy
tools for working with SAM/BAM data
Sambamba positions itself as a performant alternative
to samtools and provides tools for
* Powerful filtering with sambamba view --filter
* Picard-like SAM header merging in the merge tool
* Optional for operations on whole BAMs
* Fast copying of a region to a new file with the slice tool
* Duplicate marking/removal, using the Picard criteria