debian-med (3.7.1) unstable; urgency=medium
* Remove libbiod-dev
* Remove r-cran-rsgcc (see #1002794)
* Remove r-other-hms-dbmi-spp since it is r-cran-spp
* Standards-Version: 4.6.0
* start of automatic changelog entry *
* Changes in metapackage dependencies
-med-bio
added:
Recommends: r-bioc-mofa2, igblast, tipp, haploview, cutesv,
python3-cogent3
Suggests: r-bioc-isoformswitchanalyzer, catfishq, nano-snakemake,
tandem-genotypes, illustrate
removed:
Recommends: hinge, r-bioc-pcamethods, python3-cogent,
r-other-hms-dbmi-spp, haploview-cran-amap, compclust,
gassst, ccs, ncbi-igblast
Suggests: r-cran-rsgcc, r-bioc-org.ce.eg.db, r-bioc-org.rn.eg.db
-med-bio-dev
added:
Recommends: goby-java, python3-cigar, python3-pangolearn,
python3-compclust
removed:
Recommends: libgoby-java, r-other-hms-dbmi-spp, pangolearn, libbiod-dev,
python3-hyphy
Suggests: r-cran-rsgcc
-med-bio-ngs
added:
Recommends: q2cli
Suggests: r-bioc-mofa2, r-bioc-isoformswitchanalyzer
-med-covid-19
added:
Recommends: tipp, python3-idseq-dag, r-cran-kernelheaping
removed:
Recommends: idseq-dag
-med-epi
added:
Recommends: r-cran-kernelheaping
-med-imaging
added:
Suggests: illustrate
-med-imaging-dev
added:
Recommends: libvtk9-dev, libinsighttoolkit5-dev
Suggests: libvtk7-dev
removed:
Recommends: libvtk7-dev, libinsighttoolkit4-dev
Suggests: libvtk6-dev
-- Andreas Tille <email address hidden> Wed, 12 Jan 2022 20:44:28 +0100
debian-med (3.7) unstable; urgency=medium
* Re-render metapackages according the package pool in bullseye
* start of automatic changelog entry *
* Changes in metapackage dependencies
-med-bio
added:
Recommends: bio-vcf, uncalled, covpipe, fastani, bioawk, bamclipper
Suggests: r-bioc-structuralvariantannotation
-med-bio-dev
added:
Recommends: libbio-db-ncbihelper-perl, libbio-variation-perl,
python3-scanpy, libbio-db-biofetch-perl, libbio-db-embl-perl,
python3-wdlparse, pangolearn, libpdb-redo-dev
Suggests: r-bioc-structuralvariantannotation
-med-covid-19
added:
Recommends: uncalled, covpipe, fastani, python3-scanpy, nthash,
bamclipper
-med-epi
added:
Suggests: python3-epimodels
-med-imaging
added:
Recommends: python3-nipype, bart-cuda
removed:
Suggests: python-nipype
-med-imaging-dev
added:
Recommends: python3-nipype, python3-brian, python3-vigra
removed:
Suggests: python-vigra, python-nipype
-- Andreas Tille <email address hidden> Mon, 03 May 2021 21:28:56 +0200
