Copyright for metabat source package in Jammy

Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: metabat
Source: https://bitbucket.org/berkeleylab/metabat/downloads/?tab=tags

Files: *
Copyright: 2014-2020 The Regents of the University of California,
                     through Lawrence Berkeley National Laboratory (subject to receipt of any
                     required approvals from the U.S. Dept. of Energy).  All rights reserved.
License: BerkeleyLabs
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions are met:
 .
 (1) Redistributions of source code must retain the above copyright notice, this
     list of conditions and the following disclaimer.
 .
 (2) Redistributions in binary form must reproduce the above copyright notice,
     this list of conditions and the following disclaimer in the documentation
     and/or other materials provided with the distribution.
 .
 (3) Neither the name of the University of California, Lawrence Berkeley
     National Laboratory, U.S. Dept. of Energy nor the names of its contributors may
     be used to endorse or promote products derived from this software without
     specific prior written permission.
 .
 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
 WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
 DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
 ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
 (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
 LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
 ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
 (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
 SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 .
 You are under no obligation whatsoever to provide any bug fixes, patches, or
 upgrades to the features, functionality or performance of the source code
 ("Enhancements") to anyone; however, if you choose to make your Enhancements
 available either publicly, or directly to Lawrence Berkeley National
 Laboratory, without imposing a separate written license agreement for such
 Enhancements, then you hereby grant the following license: a  non-exclusive,
 royalty-free perpetual license to install, use, modify, prepare derivative
 works, incorporate into other computer software, distribute, and sublicense
 such enhancements or derivative works thereof, in binary and source code form.
 .
 If you have questions about your rights to use or distribute this software,
 please contact Berkeley Lab's technology transfer department at  TTD@lbl.gov
 referring to "MetaBAT (2014-075)."
 .
 NOTICE.  This software was developed under funding from the U.S. Department of
 Energy.  As such, the U.S. Government has been granted for itself and others
 acting on its behalf a paid-up, nonexclusive, irrevocable, worldwide license in
 the Software to reproduce, prepare derivative works, and perform publicly and
 display publicly.  Beginning five (5) years after the date permission to assert
 copyright is obtained from the U.S. Department of Energy, and subject to any
 subsequent five (5) year renewals, the U.S. Government is granted for itself
 and others acting on its behalf a paid-up, nonexclusive, irrevocable, worldwide
 license in the Software to reproduce, prepare derivative works, distribute
 copies to the public, perform publicly and display publicly, and to permit
 others to do so.

Files: src/kseq.h
Copyright: 2008, 2009, 2011 Attractive Chaos 
License: MIT

Files: cmake/htslib.cmake
       cmake/zlib.cmake
Copyright: 2014-2015, NVIDIA CORPORATION
           2015, Nuno Subtil 
License: BSD-3-clause
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions are met:
   * Redistributions of source code must retain the above copyright
     notice, this list of conditions and the following disclaimer.
   * Redistributions in binary form must reproduce the above copyright
     notice, this list of conditions and the following disclaimer in the
     documentation and/or other materials provided with the distribution.
   * Neither the name of the copyright holders nor the names of its
     contributors may be used to endorse or promote products derived from
     this software without specific prior written permission.
 .
 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
 WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
 DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE LIABLE
 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
 SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
 CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
 OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Files: cmake/git-watcher.cmake
Copyright: 2019 Andrew Hardin
License: MIT

Files: debian/*
Copyright: 2020 Andreas Tille 
License: MIT

License: MIT
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal
 in the Software without restriction, including without limitation the rights
 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 copies of the Software, and to permit persons to whom the Software is
 furnished to do so, subject to the following conditions:
 .
 The above copyright notice and this permission notice shall be included in all
 copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 SOFTWARE.