libsnpeff-java 4.3t+dfsg1-2 (amd64 binary) in ubuntu jammy
SnpEff is a variant annotation and effect prediction tool. It annotates
and predicts the effects of variants on genes (such as amino acid
changes).
.
The inputs are predicted variants (SNPs, insertions, deletions and
MNPs). The input file is usually obtained as a result of a sequencing
experiment, and it is usually in variant call format (VCF).
.
SnpEff analyzes the input variants. It annotates the variants and
calculates the effects they produce on known genes (e.g. amino acid
changes).
.
This package contains the library.
Details
- Package version:
- 4.3t+dfsg1-2
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of snpeff 4.3t+dfsg1-2 in ubuntu jammy PROPOSED produced
these files:
- libsnpeff-java_4.3t+dfsg1-2_all.deb (1.4 MiB)
Package relationships
- Depends on:
- junit4 (>= 4.13.2)
- libapfloat-java (>= 1.10.1)
- libcharts4j-java (>= 1.3)
- libcommons-cli-java (>= 1.4)
- libcommons-codec-java (>= 1.15)
- libcommons-io-java (>= 2.11.0)
- libcommons-math3-java (>= 3.6.1)
- libdistlib-java (>= 1.0)
- libfreemarker-java
- libhtsjdk-java (>= 2.23.0)
- liblog4j1.2-java (>= 1.2.17)
- libtrove3-java
- Suggests: