r-bioc-dada2 binary package in Ubuntu Jammy amd64

 The dada2 package contributes to software workflows to interpret
 sequencing data from microbiota - the relative abundance of
 bacterial and/or yeast, typically measured in the gut.
 It infers exact amplicon sequence
 variants (ASVs) from high-throughput amplicon sequencing data,
 replacing the coarser and less accurate OTU clustering approach.
 The dada2 pipeline takes as input demultiplexed fastq files, and
 outputs the sequence variants and their sample-wise abundances
 after removing substitution and chimera errors. Taxonomic
 classification is available via a native implementation of the RDP
 naive Bayesian classifier, and species-level assignment to 16S
 rRNA gene fragments by exact matching.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2022-03-14 06:09:11 UTC Published Ubuntu Jammy amd64 release universe gnu-r Optional 1.22.0+dfsg-1build2
  • Published
  • Copied from ubuntu jammy-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Jammy amd64 proposed universe gnu-r Optional 1.22.0+dfsg-1build2
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2022-03-14 06:09:16 UTC Superseded Ubuntu Jammy amd64 release universe gnu-r Optional 1.22.0+dfsg-1build1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of r-bioc-dada2 1.22.0+dfsg-1build2 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu jammy-proposed amd64 in Primary Archive for Ubuntu
  2022-03-15 06:10:08 UTC Deleted Ubuntu Jammy amd64 proposed universe gnu-r Optional 1.22.0+dfsg-1build1
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2022-03-09 20:04:16 UTC Superseded Ubuntu Jammy amd64 release universe gnu-r Optional 1.22.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of r-bioc-dada2 1.22.0+dfsg-1build1 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu jammy-proposed amd64 in Primary Archive for Ubuntu
  2022-03-11 00:10:09 UTC Deleted Ubuntu Jammy amd64 proposed universe gnu-r Optional 1.22.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2021-12-01 23:09:53 UTC Superseded Ubuntu Jammy amd64 release universe gnu-r Optional 1.20.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of r-bioc-dada2 1.22.0+dfsg-1 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu jammy-proposed amd64 in Primary Archive for Ubuntu
  2021-12-03 06:10:10 UTC Deleted Ubuntu Jammy amd64 proposed universe gnu-r Optional 1.20.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2021-11-10 17:00:29 UTC Superseded Ubuntu Jammy amd64 release universe gnu-r Optional 1.18.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of r-bioc-dada2 1.20.0+dfsg-1 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu hirsute-proposed amd64 in Primary Archive for Ubuntu