bbmap binary package in Ubuntu Lunar amd64

 The BBTools are a collection of small programs to solve recurrent
 tasks for the creative handling of short biological RNA/DNA sequences.
 This suite may be best known for its mapper, which is also the name of
 the project on sourceforge, but several tools have been added over time.
 All tools are multi-threaded, implemented platform-independently in Java:
 .
 BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling
 arbitrarily large genomes with millions of scaffolds. Handles Illumina,
 PacBio, 454, and other reads; very high sensitivity and tolerant of
 errors and numerous large indels.
 .
 BBNorm: Kmer-based error-correction and normalization tool.
 .
 Dedupe: Simplifies assemblies by removing duplicate or contained
 subsequences that share a target percent identity.
 .
 Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam,
 interleaved/paired, and ASCII-33/64, at over 500 MB/s.
 .
 BBDuk: Filters, trims, or masks reads with kmer matches to an
 artifact/contaminant file.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2022-11-20 23:49:10 UTC Published Ubuntu Lunar amd64 release universe science Optional 39.01+dfsg-2
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Lunar amd64 proposed universe science Optional 39.01+dfsg-2
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2022-11-12 01:54:17 UTC Superseded Ubuntu Lunar amd64 proposed universe science Optional 39.01+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of bbmap 39.01+dfsg-2 in ubuntu lunar PROPOSED
  • Published
  2022-11-20 23:51:57 UTC Superseded Ubuntu Lunar amd64 release universe science Optional 38.98+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of bbmap 39.01+dfsg-2 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu kinetic-proposed amd64 in Primary Archive for Ubuntu

Source package