python3-freecontact binary package in Ubuntu Lunar amd64

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the Python3 binding.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-03-01 11:34:25 UTC Published Ubuntu Lunar amd64 release universe python Optional 1.1-6build4
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Lunar amd64 proposed universe python Optional 1.1-6build4
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2023-03-01 11:34:33 UTC Superseded Ubuntu Lunar amd64 release universe python Optional 1.1-6build3
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of python-freecontact 1.1-6build4 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  2023-03-02 12:10:11 UTC Deleted Ubuntu Lunar amd64 proposed universe python Optional 1.1-6build3
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2022-11-07 11:36:04 UTC Superseded Ubuntu Lunar amd64 release universe python Optional 1.1-6build2
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of python-freecontact 1.1-6build3 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu kinetic-proposed amd64 in Primary Archive for Ubuntu