Ubuntu

Binary package “unikmer” in ubuntu mantic

  1. Mantic (23.10)
  2. unikmer

Toolkit for nucleic acid k-mer analysis

 unikmer is a golang package and a toolkit for nucleic acid k-mer
 analysis, providing functions including set operation k-mers
 optional with TaxIDs but without count information.
 .
 K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64,
 and serialized in binary file with extension .unik.
 .
 TaxIDs can be assigned when counting k-mers from genome
 sequences, and LCA (Lowest Common Ancestor) is computed during set
 opertions including computing union, intersecton, set difference,
 unique and repeated k-mers.

Source package