hhsuite binary package in Ubuntu Mantic arm64

 HH-suite is an open-source software package for sensitive protein sequence
 searching based on the pairwise alignment of hidden Markov models (HMMs).
 .
 This package contains HHsearch and HHblits among other programs and utilities.
 .
 HHsearch takes as input a multiple sequence alignment (MSA) or profile HMM
 and searches a database of HMMs (e.g. PDB, Pfam, or InterPro) for homologous
 proteins. HHsearch is often used for protein structure prediction to detect
 homologous templates and to build highly accurate query-template pairwise
 alignments for homology modeling.
 .
 HHblits can build high-quality MSAs starting from single sequences or from
 MSAs. It transforms these into a query HMM and, using an iterative search
 strategy, adds significantly similar sequences from the previous search to
 the updated query HMM for the next search iteration. Compared to PSI-BLAST,
 HHblits is faster, up to twice as sensitive and produces more accurate
 alignments.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-08-26 14:05:11 UTC Published Ubuntu Mantic arm64 release universe science Extra 3.3.0+ds-8
  • Published
  • Copied from ubuntu mantic-proposed arm64 in Primary Archive for Ubuntu
  Deleted Ubuntu Mantic arm64 proposed universe science Extra 3.3.0+ds-8
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to mantic

  • Published
  2023-08-26 14:21:50 UTC Superseded Ubuntu Mantic arm64 release universe science Extra 3.3.0+ds-7
  • Removal requested .
  • Superseded by arm64 build of hhsuite 3.3.0+ds-8 in ubuntu mantic PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed arm64 in Primary Archive for Ubuntu

Source package