libfreecontact0v5 binary package in Ubuntu Mantic arm64

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the shared library implementing freecontact.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-05-18 21:39:03 UTC Published Ubuntu Mantic arm64 release universe libs Optional 1.0.21-13
  • Published
  • Copied from ubuntu mantic-proposed arm64 in Primary Archive for Ubuntu
  Deleted Ubuntu Mantic arm64 proposed universe libs Optional 1.0.21-13
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to mantic

  • Published
  2023-05-18 21:39:32 UTC Superseded Ubuntu Mantic arm64 release universe libs Optional 1.0.21-12
  • Removal requested .
  • Superseded by arm64 build of freecontact 1.0.21-13 in ubuntu mantic PROPOSED
  • Published
  • Copied from ubuntu jammy-proposed arm64 in Primary Archive for Ubuntu