Copyright for cctbx source package in Noble

Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: CCTBX
Upstream-Contact: Luc J. Bourhis 
                  Nathaniel Echols 
                  Ralf W. Grosse-Kunstleve 
Source: https://github.com/cctbx/cctbx_project
Files-Excluded: */antlr3
                */msvc9.0_include
                crys3d/hklviewer/ngl.js
                crys3d/hklviewer/html2canvas.min.js
                */.azure-pipelines
                */.github
                */.gitattributes
                */.gitignore
Files-Excluded-dxtbx: */.azure-pipelines
                      */.github
                      */.gitattributes
                      */.gitignore

Files: *
Copyright: 2006-2018 The Regents of the University of California,
             through Lawrence Berkeley National Laboratory
           2005 Jacob N. Smith, Erik Mckee, Texas Agricultural
           2005 Jacob N. Smith & Erik McKee
           2013 Sunset Lake Software
           2013-2015 Diamond Light Source
           2005-2009 Jim Idle, Temporal Wave LLC
           2013 Diamond Light Source, James Parkhurst & Richard Gildea
           2016 STFC Rutherford Appleton Laboratory, UK.
           1996 John Wiley & Sons, Inc.
           2016 Lawrence Berkeley National Laboratory (LBNL)
           2007-2011 Jeffrey J. Headd and Robert Immormino
           2005-2009 Jim Idle, Temporal Wave LLC
           2010 University of California
License: BSD-3-clause

Files: dox.sphinx/generate_modules.py
Copyright: 2008 Société des Arts technologiques (SAT)
           2010 Thomas Waldmann 
License: GPL-2+

Files: libtbx/cluster.py libtbx/clusterTests.py
Copyright: 2006 Michel Albert
License: LGPL-2.1+

Files: libtbx/fastentrypoints.py
Copyright: 2016 Aaron Christianson
License: BSD-2-clause

Files: libtbx/objgraph.py
Copyright: 2008 Marius Gedminas 
License: Expat

Files: gltbx/glext.h
Copyright: 2007-2010 The Khronos Group Inc.
License: Expat

Files: libtbx/xmlrpc_utils.py
Copyright: 1999-2002 Secret Labs AB / 1999-2002 Fredrik Lundh
License: Expat

Files: mmtbx/probe/* mmtbx/programs/* mmtbx/reduce/* mmtbx/regression/* mmtbx/suitename/*
Copyright: 2021, Richardson Lab at Duke
           2021 Richardson Lab at Duke University
License: Apache-2.0

Files: mmtbx/domains_from_pae.py
Copyright: 2021 Tristan Croll
License: Expat

Files: scitbx/auto_array.h
Copyright: 2001-2002 Peter Dimov
           1998 1999 Greg Colvin and Beman Dawes.
License: Boost

Files: spotfinder/*
Copyright: 2003 The Board of Trustees of the Leland Stanford Junior University
License: Expat

Files: wxtbx/checklistctrl.py
Copyright: 2010 University of California
License: LGPL-2.1+

Files: wxtbx/metallicbutton.py
Copyright: 2007 Cody Precord 
           2010 University of California
License: wxWindows

Files: boost_adaptbx/graph/breadth_first_search.py
Copyright: 2005 The Trustees of Indiana University.
License: Boost

Files: cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp
Copyright: 2009 Nicholas K. Sauter
License: LGPL-2.1+

Files: cma_es/*
Copyright: 1996, 2003-2010 Nikolaus Hansen
License: LGPL-2.1+

Files: crys3d/hklviewer/*
Copyright: 2019 oeffner
           2012 Niklas von Hertzen
           2014-2017 Alexander S Rose
           Microsoft Corporation.
           2020 Niklas von Hertzen 
License: Expat

Files: rstbx/slip_viewer/pyslip.py rstbx/slip_viewer/slip_display.py
Copyright: 2010 Ross Wilson (rzzzwilson@gmail.com)
License: BSD-2-clause

Files: scitbx/array_family/shared_plain.h
Copyright: 1999 Boris Fomitchev
           1997 Moscow Center for SPARC Technology
           1996-1997 Silicon Graphics Computer Systems, Inc.
           1994 Hewlett-Packard Company
License: own-risk

Files: scitbx/random/mersenne_twister.h
Copyright: 2000-2001 Jens Maurer
License: Boost

Files: spotfinder/servers/multipart_encoder.py
Copyright: 2002 Wade Leftwich
License: Expat

Files: cctbx/uctbx/*
Copyright: 2013 Andrews, Lawrence C and Bernstein, H. J.
           2014 McGill, Keith J and Asadi, Mojgan and Karakasheva, Maria T and Andrews, L. C. and Bernstein, H. J.
License: LGPL-2.1+

Files: mmtbx/regression/pdbs/pae.pdb
Copyright: (2021) DEEPMIND TECHNOLOGIES LIMITED.
License: CC-BY-4.0

Files: mmtbx/bulk_solvent/* mmtbx/dynamics/* mmtbx/f_model/* mmtbx/masks/* mmtbx/max_lik/* mmtbx/tls/* mmtbx/utils/*
Copyright: Berkeley Lab 
           U.S. Dept. of Energy
           Computational Crystallography Group, Lawrence Berkeley National Laboratory 
License: MMTBX

Files: debian/*
Author: Baptiste Carvello 
        Picca Frédéric-Emmanuel 
        Radostan Riedel 
Copyright: Copyright © 2012 Baptiste Carvello 
           Copyright © 2012 Picca Frédéric-Emmanuel 
           Copyright © 2012 Radostan Riedel 
License: BSD-3-clause

License: Apache-2.0
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 reproduce, prepare derivative works, and perform publicly and display
 publicly.  Beginning five (5) years after the date permission to assert
 copyright was granted by the U.S. Dept. of Energy, and subject to any
 subsequent five (5) year renewals, the U.S. Government is granted for
 itself and others acting on its behalf a paid-up, nonexclusive,
 irrevocable, worldwide license in the Software to reproduce, prepare
 derivative works, distribute copies to the public, perform publicly and
 display publicly, and to permit others to do so.
 .
 5.      WARRANTY DISCLAIMER.  THE SOFTWARE IS SUPPLIED "AS IS" WITHOUT
 WARRANTY OF ANY KIND.  BERKELEY LAB, ITS LICENSORS, THE UNITED STATES,
 THE UNITED STATES DEPARTMENT OF ENERGY, AND THEIR EMPLOYEES: (1)
 DISCLAIM ANY WARRANTIES, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED
 TO ANY IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR
 PURPOSE, TITLE OR NON-INFRINGEMENT, (2) DO NOT ASSUME ANY LEGAL
 LIABILITY OR RESPONSIBILITY FOR THE ACCURACY, COMPLETENESS, OR
 USEFULNESS OF THE SOFTWARE, (3) DO NOT REPRESENT THAT USE OF THE
 SOFTWARE WOULD NOT INFRINGE PRIVATELY OWNED RIGHTS, (4) DO NOT WARRANT
 THAT THE SOFTWARE WILL FUNCTION UNINTERRUPTED, THAT IT IS ERROR-FREE OR
 THAT ANY ERRORS WILL BE CORRECTED.
 .
 6.      LIMITATION OF LIABILITY. IN NO EVENT WILL BERKELEY LAB OR ITS
 LICENSORS BE LIABLE FOR ANY INDIRECT, INCIDENTAL, CONSEQUENTIAL,
 SPECIAL OR PUNITIVE DAMAGES OF ANY KIND OR NATURE, INCLUDING BUT NOT
 LIMITED TO LOSS OF PROFITS OR LOSS OF DATA, FOR ANY REASON WHATSOEVER,
 WHETHER SUCH LIABILITY IS ASSERTED ON THE BASIS OF CONTRACT, TORT
 (INCLUDING NEGLIGENCE OR STRICT LIABILITY), OR OTHERWISE, EVEN IF
 BERKELEY LAB HAS BEEN WARNED OF THE POSSIBILITY OF SUCH LOSS OR
 DAMAGES.  IN NO EVENT SHALL BERKELEY LAB'S LIABILITY FOR DAMAGES
 ARISING FROM OR IN CONNECTION WITH THIS AGREEMENT EXCEED THE AMOUNT
 PAID BY YOU FOR THE SOFTWARE.
 .
 7.      INDEMNITY.  You shall indemnify, defend, and hold harmless
 Berkeley Lab, the U.S. Government, the Software developers, the
 Software sponsors, and their agents, officers, and employees, against
 any and all claims, suits, losses, damage, costs, fees, and expenses
 arising out of or in connection with this Agreement.  You shall pay all
 costs incurred by Berkeley Lab in enforcing this provision, including
 reasonable attorney fees.
 .
 8.      TERM AND TERMINATION.  The license granted to you under this
 Agreement will continue perpetually unless terminated by Berkeley Lab
 in accordance with this Agreement.  If you breach any term of this
 Agreement, and fail to cure such breach within thirty (30) days of the
 date of written notice, this Agreement shall immediately terminate.
 Upon such termination, you shall immediately cease using the Software,
 return to Berkeley Lab, or destroy, all copies of the Software, and
 provide Berkeley Lab with written certification of your compliance with
 the foregoing.  Termination shall not relieve you from your obligations
 arising prior to such termination. Notwithstanding any provision of
 this Agreement to the contrary, Sections 5 through 11 shall survive
 termination of this Agreement.
 .
 9.      EXPORT CONTROLS. You shall observe all applicable United States
 and foreign laws and regulations (if any) with respect to the export,
 re-export, diversion or transfer of the Software, related technical
 data and direct products thereof, including, without limitation, the
 International Traffic in Arms Regulations (ITAR) and the Export
 Administration Regulations.
 .
 10.     NO ENDORSEMENT.  In accordance with California Education Code
 Section 92000, you shall not use in advertising, publicity or other
 promotional activities any name, trade name, trademark, or other
 designation of the University of California, nor shall you so use
 "Ernest Orlando Lawrence Berkeley National Laboratory" or "United
 States Department of Energy" (including any contraction, abbreviation,
 or simulation of any of the foregoing) without Berkeley Lab's prior
 written consent.
 .
 11.     GENERAL.  This Agreement shall be governed by the laws of the
 State of California, excluding its rules governing conflicts of laws.
 No provision in either party's purchase orders, or in any other
 business forms employed by either party will supersede the terms of
 this Agreement, and no modification or amendment of this Agreement is
 binding, unless in writing signed by a duly authorized representative
 of each party.  This Agreement is binding upon and shall inure to the
 benefit of Berkeley Lab, its successors and assigns.  This Agreement
 represents the entire understanding of the parties, and supersedes all
 previous communications, written or oral, relating to the subject of
 this Agreement. If you have any questions concerning this license,
 contact Lawrence Berkeley National Laboratory, Technology Transfer
 Department, One Cyclotron Road, MS 90-1070, Berkeley, CA 94720, Attn:
 Software Licensing or via e-mail at TTD@lbl.gov.
 .
 If you have any questions or feedback concerning this Software, contact
 the Computational Crystallography Group, Lawrence Berkeley National
 Laboratory, One Cyclotron Road, MS 4-230, Berkeley, CA  94720 or via
 email at cctbx@cci.lbl.gov.