hts-nim-tools 0.2.1-1 (amd64 binary) in ubuntu noble
This package provides several tools that (at least at the time of their
creation) provide functionalities beyond the routine provided by samtools
and other reverse dependencies of the htslib.
.
These new tools are
• bam-filter : filter BAM/CRAM/SAM files with a simple expression language
• count-reads: count BAM/CRAM reads in regions given in a BED file
• vcf-check : check regions of a VCF against a background for missing chunks
.
and yes, as the name suggests, these tools are all implemented in nim,
using the nim-hts (upstream: hts-nim) wrapper for the htslib.
Details
- Package version:
- 0.2.1-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of hts-nim-tools 0.2.1-1 in ubuntu hirsute PROPOSED produced
these files:
- hts-nim-tools_0.2.1-1_amd64.deb (202.5 KiB)
Package relationships
- Depends on: