presto 0.7.1-1 (ppc64el binary) in ubuntu noble
pRESTO is a toolkit for processing raw reads from high-throughput
sequencing of B cell and T cell repertoires.
.
Dramatic improvements in high-throughput sequencing technologies now
enable large-scale characterization of lymphocyte repertoires, defined
as the collection of trans-membrane antigen-receptor proteins located on
the surface of B cells and T cells. The REpertoire Sequencing TOolkit
(pRESTO) is composed of a suite of utilities to handle all stages
of sequence processing prior to germline segment assignment. pRESTO
is designed to handle either single reads or paired-end reads. It
includes features for quality control, primer masking, annotation of
reads with sequence embedded barcodes, generation of unique molecular
identifier (UMI) consensus sequences, assembly of paired-end reads and
identification of duplicate sequences. Numerous options for sequence
sorting, sampling and conversion operations are also included.
Details
- Package version:
- 0.7.1-1
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
- presto_0.7.1-1_all.deb (64.3 KiB)
Package relationships
- Depends on:
- Replaces:
- Breaks: