spaln binary package in Ubuntu Noble ppc64el
Spaln (space-efficient spliced alignment) is a stand-alone program that
maps and aligns a set of cDNA or protein sequences onto a whole genomic
sequence in a single job. It also performs spliced or ordinary alignment
after rapid similarity search against a protein sequence database,
if a genomic segment or an amino acid sequence is given as a query.
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spaln supports a combination of protein sequence database and a
given genomic segment and performs rapid similarity searches and
(semi-)global alignments of a set of protein sequence queries against
a protein sequence database. Spaln adopts multi-phase heuristics that
makes it possible to perform the job on a conventional personal computer.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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Deleted | Ubuntu Noble ppc64el | proposed | universe | science | Optional | 3.0.2+dfsg-2 | |||
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2023-10-23 22:30:24 UTC | Published | Ubuntu Noble ppc64el | release | universe | science | Optional | 2.4.13f+dfsg-1 | ||
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