centrifuge binary package in Ubuntu Noble riscv64

 Centrifuge is a very rapid and memory-efficient system for the
 classification of DNA sequences from microbial samples, with better
 sensitivity than and comparable accuracy to other leading systems. The
 system uses a novel indexing scheme based on the Burrows-Wheeler
 transform (BWT) and the Ferragina-Manzini (FM) index, optimized
 specifically for the metagenomic classification problem. Centrifuge
 requires a relatively small index (e.g., 4.3 GB for ~4,100 bacterial
 genomes) yet provides very fast classification speed, allowing it to
 process a typical DNA sequencing run within an hour. Together these
 advances enable timely and accurate analysis of large metagenomics data
 sets on conventional desktop computers.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2024-04-09 13:42:42 UTC Published Ubuntu Noble riscv64 release universe science Optional 1.0.3-12build1
  • Published
  • Copied from ubuntu noble-proposed riscv64 in Primary Archive for Ubuntu
  Deleted Ubuntu Noble riscv64 proposed universe science Optional 1.0.3-12build1
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  Deleted Ubuntu Noble riscv64 updates universe science Optional 1.0.3-11
  • Removal requested .
  • Deleted by Steve Langasek

    superseded by release

  • Published
  • Copied from ubuntu lunar-proposed riscv64 in Primary Archive for Ubuntu
  2024-04-09 13:43:00 UTC Superseded Ubuntu Noble riscv64 release universe science Optional 1.0.3-12
  • Removed from disk .
  • Removal requested .
  • Superseded by riscv64 build of centrifuge 1.0.3-12build1 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu noble-proposed riscv64 in Primary Archive for Ubuntu
  2024-04-10 18:10:23 UTC Deleted Ubuntu Noble riscv64 proposed universe science Optional 1.0.3-12
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  2024-03-29 03:56:46 UTC Superseded Ubuntu Noble riscv64 release universe science Optional 1.0.3-11
  • Removal requested .
  • Superseded by riscv64 build of centrifuge 1.0.3-12 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed riscv64 in Primary Archive for Ubuntu