libseqlib-dev binary package in Ubuntu Noble riscv64
C++ API and command line tool that provides a rapid and user-friendly
interface to BAM/SAM/CRAM files, global sequence alignment operations
and sequence assembly. Four C libraries perform core operations in
SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
and Fermi for error correction and sequence assembly. Benchmarking
indicates that SeqLib has lower CPU and memory requirements than leading
C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
and assemble reads from a CRAM file and then align with BWA-MEM.
SeqLib also provides additional capabilities, including chromosome-aware
interval queries and read plotting. Command line tools are available for
performing integrated error correction, micro-assemblies and alignment.
.
This package contains the header files and static library.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2024-04-03 13:11:29 UTC | Published | Ubuntu Noble riscv64 | release | universe | libdevel | Optional | 1.2.0+dfsg-11build2 | ||
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Deleted | Ubuntu Noble riscv64 | proposed | universe | libdevel | Optional | 1.2.0+dfsg-11build2 | |||
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2024-04-06 12:10:12 UTC | Deleted | Ubuntu Noble riscv64 | updates | universe | libdevel | Optional | 1.2.0+dfsg-11 | ||
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2024-04-03 13:24:57 UTC | Superseded | Ubuntu Noble riscv64 | release | universe | libdevel | Optional | 1.2.0+dfsg-11build1 | ||
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2024-04-04 12:10:22 UTC | Deleted | Ubuntu Noble riscv64 | proposed | universe | libdevel | Optional | 1.2.0+dfsg-11build1 | ||
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2024-03-29 03:56:46 UTC | Superseded | Ubuntu Noble riscv64 | release | universe | libdevel | Optional | 1.2.0+dfsg-11 | ||
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2024-04-06 12:10:12 UTC | Deleted | Ubuntu Noble riscv64 | proposed | universe | libdevel | Optional | 1.2.0+dfsg-11 | ||
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2023-12-15 18:33:55 UTC | Superseded | Ubuntu Noble riscv64 | release | universe | libdevel | Optional | 1.2.0+dfsg-10 | ||
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