minimap2 binary package in Ubuntu Noble s390x

 Minimap2 is a versatile sequence alignment program that aligns DNA or
 mRNA sequences against a large reference database. Typical use cases
 include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
 human genome; (2) finding overlaps between long reads with error rate up
 to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
 or Direct RNA reads against a reference genome; (4) aligning Illumina
 single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
 genome alignment between two closely related species with divergence
 below ~15%.
 .
 For ~10kb noisy reads sequences, minimap2 is tens of times faster than
 mainstream long-read mappers such as BLASR, BWA-MEM, NGMLR and GMAP. It
 is more accurate on simulated long reads and produces biologically
 meaningful alignment ready for downstream analyses. For >100bp Illumina
 short reads, minimap2 is three times as fast as BWA-MEM and Bowtie2, and
 as accurate on simulated data. Detailed evaluations are available from
 the minimap2 paper or the preprint.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2024-04-07 09:12:19 UTC Published Ubuntu Noble s390x release universe science Optional 2.26+dfsg-1build1
  • Published
  • Copied from ubuntu noble-proposed s390x in Primary Archive for Ubuntu
  Deleted Ubuntu Noble s390x proposed universe science Optional 2.26+dfsg-1build1
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  2024-04-08 18:10:16 UTC Deleted Ubuntu Noble s390x updates universe science Optional 2.24+dfsg-3build2
  • Removed from disk .
  • Removal requested .
  • Deleted by Brian Murray

    superseded by release

  • Published
  • Copied from ubuntu noble-proposed s390x in Primary Archive for Ubuntu
  2024-04-01 02:53:40 UTC Superseded Ubuntu Noble s390x proposed universe science Optional 2.26+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by s390x build of minimap2 2.26+dfsg-1build1 in ubuntu noble PROPOSED
  • Published
  2024-04-07 09:12:42 UTC Superseded Ubuntu Noble s390x release universe science Optional 2.24+dfsg-3build2
  • Removed from disk .
  • Removal requested .
  • Superseded by s390x build of minimap2 2.26+dfsg-1build1 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu noble-proposed s390x in Primary Archive for Ubuntu
  2024-04-08 18:10:16 UTC Deleted Ubuntu Noble s390x proposed universe science Optional 2.24+dfsg-3build2
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  2023-11-15 07:42:05 UTC Superseded Ubuntu Noble s390x release universe science Optional 2.24+dfsg-3build1
  • Removal requested .
  • Superseded by s390x build of minimap2 2.24+dfsg-3build2 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed s390x in Primary Archive for Ubuntu