minimap2 binary package in Ubuntu Oracular armhf

 Minimap2 is a versatile sequence alignment program that aligns DNA or
 mRNA sequences against a large reference database. Typical use cases
 include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
 human genome; (2) finding overlaps between long reads with error rate up
 to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
 or Direct RNA reads against a reference genome; (4) aligning Illumina
 single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
 genome alignment between two closely related species with divergence
 below ~15%.
 .
 For ~10kb noisy reads sequences, minimap2 is tens of times faster than
 mainstream long-read mappers such as BLASR, BWA-MEM, NGMLR and GMAP. It
 is more accurate on simulated long reads and produces biologically
 meaningful alignment ready for downstream analyses. For >100bp Illumina
 short reads, minimap2 is three times as fast as BWA-MEM and Bowtie2, and
 as accurate on simulated data. Detailed evaluations are available from
 the minimap2 paper or the preprint.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2024-05-09 13:18:46 UTC Published Ubuntu Oracular armhf release universe science Optional 2.27+dfsg-1
  • Published
  2024-05-09 13:19:50 UTC Superseded Ubuntu Oracular armhf release universe science Optional 2.26+dfsg-1build1
  • Removal requested .
  • Superseded by armhf build of minimap2 2.27+dfsg-1 in ubuntu oracular RELEASE
  • Published
  • Copied from ubuntu noble-proposed armhf in Primary Archive for Ubuntu