r-cran-bios2cor binary package in Ubuntu Oracular s390x
Analysis Utilities for computation and analysis of
correlation/
side chain motions during molecular dynamics simulations. Features
include the computation of correlation/
variety of scoring functions between either sequence positions in
alignments or side chain dihedral angles in molecular dynamics
simulations and utilities to analyze the correlation/
matrix through a variety of tools including network representation
and principal components analysis. In addition, several utility
functions are based on the R graphical environment to provide
friendly tools for help in data interpretation. Examples of
sequence covariation analysis are provided in: (1) Pele J, Moreau
M, Abdi H, Rodien P, Castel H, Chabbert M (2014)
<doi:10.
Tiss A, Guissouma H, Abdi H, Henrion D, Chabbert M (2018) <doi:
10.1371/
motion analysis is provided in: Taddese B, Garnier A, Abdi H,
Henrion D, Chabbert M (2020) <doi: 10.1038/
1>. This work was supported by the French National Research
Agency (Grant number: ANR-11-BSV2-026) and by GENCI (Grant
number: 100567).
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2024-04-29 18:55:16 UTC | Published | Ubuntu Oracular s390x | release | universe | gnu-r | Optional | 2.2.1-1 | ||
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