emboss 6.3.1-6ubuntu1 source package in Ubuntu
Changelog
emboss (6.3.1-6ubuntu1) precise; urgency=low
* d/patches/fix-mysql-macro.patch: use LIBS rather than LDFLAGS
so mysql libraries are detected properly.
* d/control,d/rules: use dh_autoreconf to enact mysql changes
* d/rules: remove git cleanup as it breaks clean on non-git
managed builds.
* d/rules: patch before configure to pick up m4 changes
-- Clint Byrum <email address hidden> Sun, 27 Nov 2011 17:20:43 -0800
Upload details
- Uploaded by:
- Clint Byrum
- Uploaded to:
- Precise
- Original maintainer:
- Ubuntu Developers
- Architectures:
- any all
- Section:
- science
- Urgency:
- Low Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| emboss_6.3.1.orig.tar.gz | 22.5 MiB | 4f3290600a970c2a23a7e47f884d1fc8156ec40538f7191a6e83e23680d27a8d |
| emboss_6.3.1-6ubuntu1.diff.gz | 264.1 KiB | 10dea84f7851fd9c5bc883174c8ad4fc5ef077d456902bf9ff37277686384163 |
| emboss_6.3.1-6ubuntu1.dsc | 2.1 KiB | a15c470d0116e1c15267404e1686978fb9d2eef6c3fc3e92f34b9197afbcdd4b |
Available diffs
Binary packages built by this source
- emboss: the european molecular biology open software suite
EMBOSS is a free Open Source software analysis package specially developed for
the needs of the molecular biology (e.g. EMBnet) user community. The software
automatically copes with data in a variety of formats and even allows
transparent retrieval of sequence data from the web. Also, as extensive
libraries are provided with the package, it is a platform to allow other
scientists to develop and release software in true open source spirit. EMBOSS
also integrates a range of currently available packages and tools for sequence
analysis into a seamless whole. EMBOSS breaks the historical trend towards
commercial software packages.
- emboss-data: data files for the EMBOSS package
This package includes data files needed by EMBOSS, the European Molecular
Biology Open Software Suite.
- emboss-doc: documentation for EMBOSS
This package includes non-essential user documentation for EMBOSS, the
European Molecular Biology Open Software Suite.
- emboss-lib: EMBOSS Libraries
This package contains the core libraries of the European Molecular Biology
Open Software Suite, EMBOSS.
.
AJAX covers standard data structures, including strings, sequences, file
handles, queues, hashes, heaps, lists, dictionaries, trees and dynamic
arrays. It also covers standard algorithms including comparisons, pattern
matching, sorting, and iterators. AJAX will also provide a set of high level
graphics functions suited to the needs of sequence analysis applications.
.
The NUCLEUS library provides higher-level functions specific to molecular
sequence analysis, including sequence comparisons, translation, codon usage
and annotation.
.
It also contains a eplplot, an EMBOSS, a fork of the plplot library.
.
In Debian, these libraries are to be considered private.
- emboss-test: test files for the EMBOSS package
This package includes test files for EMBOSS, the European Molecular Biology
Open Software Suite.
.
It is a good idea to use the data from this package for your bug reports when
possible.
- jemboss: graphical user interface to EMBOSS
Jemboss is a Graphical User Interface (GUI) to EMBOSS, the European Molecular
Biology Open Software Suite. It is part of the EMBOSS distribution.
