Binary package “tophat” in ubuntu trusty
fast splice junction mapper for RNA-Seq reads
TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra
high-throughput short read aligner Bowtie, and then analyzes the
mapping results to identify splice junctions between exons.
TopHat is a collaborative effort between the University of Maryland
Center for Bioinformatics and Computational Biology and the
University of California, Berkeley Departments of Mathematics and
Molecular and Cell Biology.
Source package
Published versions
- tophat 2.0.9-1ubuntu1 in amd64 (Proposed)
- tophat 2.0.9-1ubuntu1 in amd64 (Release)
- tophat 2.0.9-1ubuntu1 in arm64 (Proposed)
- tophat 2.0.9-1ubuntu1 in arm64 (Release)
- tophat 2.0.9-1ubuntu1 in armhf (Proposed)
- tophat 2.0.9-1ubuntu1 in armhf (Release)
- tophat 2.0.9-1ubuntu1 in i386 (Proposed)
- tophat 2.0.9-1ubuntu1 in i386 (Release)
- tophat 2.0.9-1ubuntu1 in powerpc (Proposed)
- tophat 2.0.9-1ubuntu1 in powerpc (Release)
- tophat 2.0.9-1ubuntu1 in ppc64el (Release)