topp binary package in Ubuntu Trusty i386

 TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis
 of HPLC/MS data. It consists of a set of numerous small applications
 that can be chained together to create analysis pipelines tailored
 for a specific problem. The applications make use of the libopenms
 library. Some examples of these applications are :
 .
   - TOPPView: A viewer for mass spectrometry data.
   - TOPPAS: An assistant for GUI-driven TOPP workflow design.
   - DTAExtractor: Extracts spectra of an MS run file to several
     files in DTA format.
   - FileConverter: Converts between different MS file formats.
   - FileFilter: Extracts or manipulates portions of data from peak,
     feature or consensus feature files.
   - SpectraMerger: Merges spectra from an LC/MS map, either by
     precursor or by RT blocks.
   - BaselineFilter: Removes the baseline from profile spectra using a
     top-hat filter.
   - InternalCalibration: Applies an internal calibration.
   - PTModel: Trains a model for the prediction of proteotypic
     peptides from a training set.
   - RTPredict: Predicts retention times for peptides using a model
     trained by RTModel.
   - ExecutePipeline: Executes workflows created by TOPPAS.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2014-01-30 04:33:38 UTC Published Ubuntu Trusty i386 release universe science Optional 1.11.1-3
  • Published
  • Copied from ubuntu trusty-proposed i386 in Primary Archive for Ubuntu
  Deleted Ubuntu Trusty i386 proposed universe science Optional 1.11.1-3
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2013-12-29 06:10:11 UTC Deleted Ubuntu Trusty i386 release universe science Optional 1.9.0-4ubuntu2
  • Removed from disk .
  • Removal requested .
  • Deleted by Adam Conrad

    Not in Debian testing

  • Published
  • Copied from ubuntu trusty-proposed i386 in Primary Archive for Ubuntu
  2013-12-29 06:10:11 UTC Deleted Ubuntu Trusty i386 proposed universe science Optional 1.9.0-4ubuntu2
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2013-10-27 05:18:36 UTC Superseded Ubuntu Trusty i386 release universe science Optional 1.9.0-4ubuntu1
  • Removed from disk .
  • Removal requested .
  • Superseded by i386 build of openms 1.9.0-4ubuntu2 in ubuntu trusty PROPOSED
  • Published
  • Copied from ubuntu saucy-proposed i386 in Primary Archive for Ubuntu

Source package