libfreecontact0 binary package in Ubuntu Trusty powerpc

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the shared library implementing freecontact.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2014-03-08 19:03:20 UTC Published Ubuntu Trusty powerpc release universe libs Extra 1.0.21-3
  • Published
  • Copied from ubuntu trusty-proposed powerpc in Primary Archive for Ubuntu
  Deleted Ubuntu Trusty powerpc proposed universe libs Extra 1.0.21-3
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2014-03-08 19:03:29 UTC Superseded Ubuntu Trusty powerpc release universe libs Extra 1.0.21-1ubuntu2
  • Removed from disk .
  • Removal requested .
  • Superseded by powerpc build of freecontact 1.0.21-3 in ubuntu trusty PROPOSED
  • Published
  • Copied from ubuntu trusty-proposed powerpc in Primary Archive for Ubuntu
  2014-03-10 00:10:09 UTC Deleted Ubuntu Trusty powerpc proposed universe libs Extra 1.0.21-1ubuntu2
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2013-12-29 04:53:46 UTC Superseded Ubuntu Trusty powerpc release universe libs Extra 1.0.21-1ubuntu1
  • Removed from disk .
  • Removal requested .
  • Superseded by powerpc build of freecontact 1.0.21-1ubuntu2 in ubuntu trusty PROPOSED
  • Published
  • Copied from ubuntu trusty-proposed powerpc in Primary Archive for Ubuntu
  2013-12-30 06:10:11 UTC Deleted Ubuntu Trusty powerpc proposed universe libs Extra 1.0.21-1ubuntu1
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published