Debian Med

PPA description

Packages in Debian make it nicely to the very latest of Ubuntu, if there is not a freeze, but not necessarily into the various production environments that one would like to see them in. So, this PPA is thought to perform a bit of the role that we consider http://backports.debian.org to take for Debian. But it is not "just another backports". Also the packages that have not yet left experimental shall be found here.

This PPA contains packages related to medicine and bio-informatics.

Adding this PPA to your system

You can update your system with unsupported packages from this untrusted PPA by adding ppa:debian-med/ppa to your system's Software Sources. (Read about installing)

sudo add-apt-repository ppa:debian-med/ppa
sudo apt-get update
        
Technical details about this PPA

This PPA can be added to your system manually by copying the lines below and adding them to your system's software sources.

deb http://ppa.launchpad.net/debian-med/ppa/ubuntu trusty main 
deb-src http://ppa.launchpad.net/debian-med/ppa/ubuntu trusty main 
Signing key:
1024R/A94C3BE9F39B6B77F7C695E15F8D4E5375DD1BE7 (What is this?)
Fingerprint:
A94C3BE9F39B6B77F7C695E15F8D4E5375DD1BE7

For questions and bugs with software in this PPA please contact Debian Med.

PPA statistics

Activity
0 updates added during the past month.
View package details

Overview of published packages

162 of 62 results
Package Version Uploaded by
art-nextgen-simulation-tools 3.19.15+dfsg-0~ubuntu14.04~ppa1 Andreas Tille (2016-02-17)
artfastqgenerator 0.0.20150519-1~ubuntu14.04~ppa1 Andreas Tille (2016-02-16)
bambamc 0.0.50-1ubuntu1 Andreas Tille (2015-03-24)
bamtools 2.3.0+dfsg-2~ubuntu14.04.1~ppa1 Michael R. Crusoe (2014-09-26)
bcftools 1.3.1-1~ubuntu14.04~ppa1 Andreas Tille (2016-07-01)
beast-mcmc 1.8.2~754b844-1ubuntu1 Andreas Tille (2015-07-20)
brig 0.95+dfsg-1~ubuntu14.04~ppa1 Andreas Tille (2016-02-18)
bwa 0.7.12-1ubuntu1 Andreas Tille (2015-03-24)
cgview 0.0.20100111-1~ubuntu14.04~ppa1 Andreas Tille (2016-02-18)
cmake 3.2.2-2ubuntu1 Andreas Tille (2015-07-15)
cython 0.23.4+git4-g7eed8d8-1~ubuntu14.04~ppa1 Andreas Tille (2016-06-30)
d-shlibs 0.58~ubuntu14.04.1~ppa1 Michael R. Crusoe (2014-09-26)
ecopcr 0.5.0-1ubuntu1 Andreas Tille (2015-06-25)
eigensoft 6.1.4+dfsg-1ubuntu2 Steffen Möller (2018-02-11)
fastqc 0.11.5+dfsg-6ubuntu2 Tony Travis (2018-02-11)
genometools 1.5.9+ds-2~ubuntu14.04~ppa1 Sascha Steinbiss (2016-07-29)
htsjdk 1.138+dfsg.1-4~ubuntu14.04~ppa1 Andreas Tille (2016-08-01)
htslib 1.3.1-1~ubuntu14.04~ppa1 Andreas Tille (2016-06-30)
hyphy 2.2.6+dfsg-1ubuntu1 Andreas Tille (2015-09-30)
jam-lib 0.1.20140824-1ubuntu1 Andreas Tille (2015-07-20)
kraken 0.10.5~beta-0~ubuntu14.04~ppa1 Andreas Tille (2016-03-17)
kronatools 2.7+dfsg-0~ubuntu14.04~ppa2 Andreas Tille (2016-08-04)
lefse 1.0+20160802-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-04)
libcolt-free-java 1.2.0+dfsg-4ubuntu1 Andreas Tille (2015-07-20)
libhat-trie 0.1.2-1ubuntu1 Tony Travis (2018-02-12)
libhmsbeagle 2.1.2+20150609-1ubuntu1 Andreas Tille (2015-07-20)
libmems 1.6.0+4725-1ubuntu1 Andreas Tille (2015-04-20)
libmuscle 3.7+4565-0ubuntu2 Andreas Tille (2015-04-20)
libzeus-jscl-java 1.72-1ubuntu1 Andreas Tille (2015-04-27)
mapdamage 2.0.6+dfsg-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-04)
mauve-aligner 2.4.0+4734~-1ubuntu1 Andreas Tille (2015-07-18)
metaphlan2 2.5.0-0~ubuntu14.04~ppa1 Andreas Tille (2016-07-28)
microbegps 1.0.0-0ubuntu1 Andreas Tille (2015-05-06)
mrbayes 3.2.5+dfsg-1ubuntu1 Andreas Tille (2015-06-29)
mummer 3.23~dfsg-3ubuntu1 Andreas Tille (2015-04-16)
murasaki 1.68.6-0ubuntu1 Andreas Tille (2015-04-16)
picard-tools 1.138+dfsg.1-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-01)
placnet 1.03-2~ubuntu14.04.1~ppa1 Andreas Tille (2016-05-26)
plast 2.3.1+dfsg-2~ubuntu14.04~ppa1 Andreas Tille (2016-02-10)
plink1.9 1.90~b5.2-180109-1ubuntu3 Steffen Möller (2018-02-11)
prodigal 1:2.6.1-1~ubuntu14.10.1~ppa1 Michael R. Crusoe (2015-01-27)
progressivemauve 1.2.0+4713-1ubuntu1 Andreas Tille (2015-05-20)
python-matplotlib-venn 0.11-0ubuntu1 Andreas Tille (2015-05-06)
python-pyfaidx 0.4.2-1~ubuntu1 Andreas Tille (2015-10-20)
python-pysam 0.9.1+ds-1~ubuntu14.04~ppa1 Andreas Tille (2016-07-01)
python-pyvcf 0.6.7-1~ubuntu1 Andreas Tille (2015-10-15)
python-subprocess32 3.2.6-1ubuntu1 Andreas Tille (2015-06-26)
r-bioc-savr 1.10.0-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-18)
r-cran-cairo 1.5-9-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-22)
r-cran-gridextra 2.2.1-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-18)
r-cran-matrixmodels 0.4-1-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-18)
r-cran-quantreg 5.26-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-18)
r8s 1.8+ds-0ubuntu1 Andreas Tille (2015-06-23)
rmatrix 1.2-6-1~ubuntu14.04~ppa1 Andreas Tille (2016-08-18)
samtools 1.6-4unbuntu1 Steffen Möller (2018-02-11)
screed 0.7.1-1ubuntu1 Michael R. Crusoe (2014-09-26)
sga 0.10.13-1 Michael R. Crusoe (2014-09-26)
sickle 1.33-1ubuntu1 Andreas Tille (2015-06-29)
smalt 0.7.6-4ubuntu1 Andreas Tille (2015-03-24)
trimmomatic 0.36+dfsg-3ubuntu2 Tony Travis (2018-02-12)
varscan 2.3.7+dfsg-1ubuntu1 Andreas Tille (2015-03-24)
vsearch 1.9.10-1~ubuntu14.04~ppa1 Andreas Tille (2016-02-09)
162 of 62 results

Latest updates

  • libhat-trie 26 weeks ago
    Successfully built
  • trimmomatic 26 weeks ago
    Successfully built
  • samtools 27 weeks ago
    Failed to build: amd64 i386
  • plink1.9 27 weeks ago
    Successfully built
  • fastqc 27 weeks ago
    Successfully built