SignS: Molecular signatures with survival data

Registered 2006-12-29 by Ramon Diaz-Uriarte

SignS is a web tool for gene selection and signature finding in problems where the dependent variable is patient survival or, more generally, a right-censored variable.

Installing the web application is not trivial (because of handling the CGI together with MPI); please look at the "Asterias Common" product.
The sources include an "internal" R package, also called SignS: it is an R package, but is very specific for this application. There is no formal help in the R style, and the code makes a lot of calls to python code for the figures and clickable dendrograms.

SignS is described in this paper:
http://www.biomedcentral.com/1471-2105/9/30

Project information

Part of:
Asterias Project
Maintainer:
Ramon Diaz-Uriarte
Driver:
Not yet selected
Development focus:

trunk series 

lp:signs 
Browse the code

Programming Languages:
R, Python
Licences:
GNU Affero GPL v3, GNU GPL v2
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SignS trunk series is the current focus of development

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