libseqlib 1.2.0+dfsg-8 source package in Ubuntu
Changelog
libseqlib (1.2.0+dfsg-8) unstable; urgency=medium * Provide symbols file only for amd64 to reduce maintenance burden -- Andreas Tille <email address hidden> Sun, 21 Nov 2021 06:30:55 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| libseqlib_1.2.0+dfsg-8.dsc | 2.2 KiB | 04aaa09b8a96ecdfc299dda68a7d9fc549b5502f314df52c1c99f062ec09b88a |
| libseqlib_1.2.0+dfsg.orig.tar.xz | 145.5 KiB | 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953 |
| libseqlib_1.2.0+dfsg-8.debian.tar.xz | 14.4 KiB | 60ab7e17cc733342b4bd7f1e30dd01e762454e206c1bf4d53693477b72949103 |
Available diffs
- diff from 1.2.0+dfsg-4 to 1.2.0+dfsg-8 (15.1 KiB)
- diff from 1.2.0+dfsg-7 to 1.2.0+dfsg-8 (13.3 KiB)
No changes file available.
Binary packages built by this source
- libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly
interface to BAM/SAM/CRAM files, global sequence alignment operations
and sequence assembly. Four C libraries perform core operations in
SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
and Fermi for error correction and sequence assembly. Benchmarking
indicates that SeqLib has lower CPU and memory requirements than leading
C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
and assemble reads from a CRAM file and then align with BWA-MEM.
SeqLib also provides additional capabilities, including chromosome-aware
interval queries and read plotting. Command line tools are available for
performing integrated error correction, micro-assemblies and alignment.
.
This package contains the header files and static library.
- libseqlib2: C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly
interface to BAM/SAM/CRAM files, global sequence alignment operations
and sequence assembly. Four C libraries perform core operations in
SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
and Fermi for error correction and sequence assembly. Benchmarking
indicates that SeqLib has lower CPU and memory requirements than leading
C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
and assemble reads from a CRAM file and then align with BWA-MEM.
SeqLib also provides additional capabilities, including chromosome-aware
interval queries and read plotting. Command line tools are available for
performing integrated error correction, micro-assemblies and alignment.
- libseqlib2-dbgsym: debug symbols for libseqlib2
