med-bio-dev 3.8 (ppc64el binary) in ubuntu lunar
This metapackage will install Debian packages which might be helpful
for development of applications for biological research.
Details
- Package version:
- 3.8
- Status:
- Published
- Component:
- universe
- Priority:
- Extra
Downloadable files
amd64 build of debian-med 3.8 in ubuntu lunar PROPOSED produced
these files:
- med-bio-dev_3.8_all.deb (5.7 KiB)
Package relationships
- Depends on:
- Suggests:
- bioclipse
- capsule-nextflow
- conda-package-handling
- ctdconverter
- cthreadpool-dev
- cwlformat
- libargs-dev
- libatomicqueue-dev
- libbam-dev
- libbbhash-dev
- libbiosoup-dev
- libbtllib-dev
- libcapsule-maven-nextflow-java
- libconcurrentqueue-dev
- libdisorder-dev
- libfast-perl
- libforester-java
- libfreecontact-dev
- libfreecontact-doc
- libfreecontact-perl
- libgatk-bwamem-java
- libgatk-bwamem-jni
- libgatk-fermilite-java
- libgatk-fermilite-jni
- libgatk-native-bindings-java
- libgenomicsdb-dev
- libgenomicsdb-java
- libicb-utils-java
- libmaus2-dev
- libmilib-java
- libminimap-dev
- libmmblib-dev
- libmodhmm-dev
- libnexml-java
- libngs-sdk-dev
- libpbcopper-dev
- libqcpp-dev
- librelion-dev
- libroadrunner-dev
- librostlab-blast-doc
- librostlab-doc
- libsavvy-dev
- libsuma-dev
- libsvmloc-dev
- libswarm2-dev
- libterraces-dev
- libtfbs-perl
- libvbz-hdf-plugin-dev
- libxxsds-dynamic-dev
- octace-bioinfo
- python-biopython-doc
- python3-alignlib
- python3-bcbio
- python3-bel-resources
- python3-bioblend
- python3-biopython-sql
- python3-cgelib
- python3-compclust
- python3-conda-package-streaming
- python3-consensuscore2
- python3-ctdopts
- python3-galaxy-lib
- python3-intake
- python3-joypy
- python3-misopy
- python3-ncls
- python3-networkx
- python3-pycosat
- python3-pyflow
- python3-roadrunner
- python3-scanpy
- python3-seqcluster
- python3-streamz
- q2-alignment
- q2-composition
- q2-cutadapt
- q2-dada2
- q2-deblur
- q2-demux
- q2-diversity
- q2-emperor
- q2-feature-classifier
- q2-feature-table
- q2-fragment-insertion
- q2-gneiss
- q2-longitudinal
- q2-metadata
- q2-phylogeny
- q2-quality-control
- q2-quality-filter
- q2-sample-classifier
- q2-shogun
- q2-taxa
- q2-types
- q2-vsearch
- q2cli
- q2cwl
- q2lint
- q2templates
- qiime
- r-bioc-affxparser
- r-bioc-affy
- r-bioc-affyio
- r-bioc-altcdfenvs
- r-bioc-annotate
- r-bioc-annotationdbi
- r-bioc-annotationhub
- r-bioc-aroma.light
- r-bioc-arrayexpress
- r-bioc-biocgenerics
- r-bioc-biocneighbors
- r-bioc-biomart
- r-bioc-biomformat
- r-bioc-biostrings
- r-bioc-biovizbase
- r-bioc-bitseq
- r-bioc-bridgedbr
- r-bioc-bsgenome
- r-bioc-cager
- r-bioc-cner
- r-bioc-complexheatmap
- r-bioc-ctc
- r-bioc-cummerbund
- r-bioc-dada2
- r-bioc-deseq
- r-bioc-deseq2
- r-bioc-dnacopy
- r-bioc-ebseq
- r-bioc-enrichedheatmap
- r-bioc-ensembldb
- r-bioc-genefilter
- r-bioc-geneplotter
- r-bioc-genomeinfodb
- r-bioc-genomicalignments
- r-bioc-genomicfeatures
- r-bioc-genomicranges
- r-bioc-geoquery
- r-bioc-go.db
- r-bioc-graph
- r-bioc-gseabase
- r-bioc-gsva
- r-bioc-gviz
- r-bioc-hypergraph
- r-bioc-impute
- r-bioc-iranges
- r-bioc-limma
- r-bioc-makecdfenv
- r-bioc-mergeomics
- r-bioc-metagenomeseq
- r-bioc-mofa
- r-bioc-multiassayexperiment
- r-bioc-nanostringqcpro
- r-bioc-oligo
- r-bioc-oligoclasses
- r-bioc-org.hs.eg.db
- r-bioc-pcamethods
- r-bioc-phyloseq
- r-bioc-preprocesscore
- r-bioc-purecn
- r-bioc-qusage
- r-bioc-rbgl
- r-bioc-rentrez
- r-bioc-rsamtools
- r-bioc-rtracklayer
- r-bioc-s4vectors
- r-bioc-savr
- r-bioc-shortread
- r-bioc-snpstats
- r-bioc-structuralvariantannotation
- r-bioc-tfbstools
- r-bioc-titancna
- r-bioc-tximport
- r-bioc-variantannotation
- r-bioc-xvector
- r-cran-adegenet
- r-cran-adephylo
- r-cran-amap
- r-cran-biwt
- r-cran-drinsight
- r-cran-dt
- r-cran-dynamictreecut
- r-cran-fastcluster
- r-cran-future.apply
- r-cran-future.batchtools
- r-cran-ica
- r-cran-itertools
- r-cran-kaos
- r-cran-metap
- r-cran-minerva
- r-cran-natserv
- r-cran-nmf
- r-cran-optimalcutpoints
- r-cran-parmigene
- r-cran-pcapp
- r-cran-proc
- r-cran-rann
- r-cran-rcpphnsw
- r-cran-robustrankaggreg
- r-cran-rocr
- r-cran-rook
- r-cran-rsvd
- r-cran-shazam
- r-cran-sitmo
- r-cran-venndiagram
- r-other-apmswapp
- ruby-rgfa
- vdjtools
- Recommends:
- bio-tradis
- biobambam2
- bioperl
- bioperl-run
- biosquid
- cwltool
- gffread
- goby-java
- libace-perl
- libai-fann-perl
- libbambamc-dev
- libbamtools-dev
- libbigwig-dev
- libbio-alignio-stockholm-perl
- libbio-asn1-entrezgene-perl
- libbio-chado-schema-perl
- libbio-cluster-perl
- libbio-coordinate-perl
- libbio-das-lite-perl
- libbio-db-biofetch-perl
- libbio-db-embl-perl
- libbio-db-hts-perl
- libbio-db-ncbihelper-perl
- libbio-db-seqfeature-perl
- libbio-eutilities-perl
- libbio-featureio-perl
- libbio-graphics-perl
- libbio-mage-perl
- libbio-mage-utils-perl
- libbio-primerdesigner-perl
- libbio-samtools-perl
- libbio-scf-perl
- libbio-tools-phylo-paml-perl
- libbio-tools-run-alignment-clustalw-perl
- libbio-tools-run-alignment-tcoffee-perl
- libbio-tools-run-remoteblast-perl
- libbio-variation-perl
- libbiococoa-dev
- libbiojava-java
- libbiojava4-java
- libbiojava6-java
- libbioparser-dev
- libblasr-dev
- libbpp-core-dev
- libbpp-phyl-dev
- libbpp-phyl-omics-dev
- libbpp-popgen-dev
- libbpp-qt-dev
- libbpp-raa-dev
- libbpp-seq-dev
- libbpp-seq-omics-dev
- libcdk-java
- libchado-perl
- libcifpp-dev
- libconsensuscore-dev
- libdivsufsort-dev
- libedlib-dev
- libfast5-dev
- libfastahack-dev
- libffindex0-dev
- libfml-dev
- libgatbcore-dev
- libgclib-dev
- libgenome-dev
- libgenome-model-tools-music-perl
- libgenome-perl
- libgenometools0-dev
- libgff-dev
- libgkarrays-dev
- libgo-perl
- libhdf5-dev
- libhmsbeagle-dev
- libhts-dev
- libhtscodecs-dev
- libhtsjdk-java
- libjebl2-java
- libjloda-java
- libkmer-dev
- libmems-dev
- libminimap2-dev
- libmuscle-dev
- libncbi-vdb-dev
- libncbi6-dev
- libncl-dev
- libngs-java
- libnhgri-blastall-perl
- libopenmm-dev
- libopenms-dev
- libpal-java
- libparasail-dev
- libpbbam-dev
- libpbdata-dev
- libpbihdf-dev
- libpbseq-dev
- libpdb-redo-dev
- libpll-dev
- libpwiz-dev
- libqes-dev
- librcsb-core-wrapper0-dev
- librdp-taxonomy-tree-java
- librg-blast-parser-perl
- librg-reprof-bundle-perl
- librostlab-blast0-dev
- librostlab3-dev
- libsbml5-dev
- libseqan2-dev
- libseqan3-dev
- libseqlib-dev
- libslow5-dev
- libsmithwaterman-dev
- libsnp-sites1-dev
- libsort-key-top-perl
- libspoa-dev
- libsrf-dev
- libssm-dev
- libssu-dev
- libssw-dev
- libssw-java
- libstaden-read-dev
- libstatgen-dev
- libswiss-perl
- libtabixpp-dev
- libthread-pool-dev
- libvcflib-dev
- libvibrant6-dev
- libzerg-perl
- libzerg0-dev
- mcl
- nim-hts-dev
- nim-kexpr-dev
- nim-lapper-dev
- ont-fast5-api
- pyfai
- python3-airr
- python3-anndata
- python3-bcbio-gff
- python3-bioframe
- python3-biom-format
- python3-biomaj3
- python3-biopython
- python3-biotools
- python3-bx
- python3-cgecore
- python3-cigar
- python3-cobra
- python3-cogent3
- python3-cooler
- python3-corepywrap
- python3-csb
- python3-cutadapt
- python3-cyvcf2
- python3-deeptools
- python3-deeptoolsintervals
- python3-dendropy
- python3-dnaio
- python3-ete3
- python3-fast5
- python3-freecontact
- python3-gfapy
- python3-gffutils
- python3-gtfparse
- python3-htseq
- python3-intervaltree-bio
- python3-kineticstools
- python3-loompy
- python3-mirtop
- python3-nanoget
- python3-ngs
- python3-pairix
- python3-pangolearn
- python3-parasail
- python3-pbcommand
- python3-pbconsensuscore
- python3-pbcore
- python3-peptidebuilder
- python3-presto
- python3-propka
- python3-py2bit
- python3-pyabpoa
- python3-pyani
- python3-pybedtools
- python3-pybel
- python3-pybigwig
- python3-pyfaidx
- python3-pyfastx
- python3-pymummer
- python3-pyranges
- python3-pysam
- python3-pyspoa
- python3-pyvcf
- python3-rdkit
- python3-ruffus
- python3-screed
- python3-shasta
- python3-skbio
- python3-slow5
- python3-sqt
- python3-tinyalign
- python3-torch
- python3-treetime
- python3-unifrac
- python3-wdlparse
- r-bioc-biobase
- r-cran-boolnet
- r-cran-corrplot
- r-cran-distory
- r-cran-fitdistrplus
- r-cran-forecast
- r-cran-genetics
- r-cran-gprofiler2
- r-cran-haplo.stats
- r-cran-metamix
- r-cran-phangorn
- r-cran-pheatmap
- r-cran-phylobase
- r-cran-pscbs
- r-cran-qqman
- r-cran-rentrez
- r-cran-rncl
- r-cran-rnexml
- r-cran-rotl
- r-cran-samr
- r-cran-sctransform
- r-cran-seqinr
- r-cran-seurat
- r-cran-tsne
- r-cran-vegan
- r-cran-webgestaltr
- ruby-bio
- ruby-crb-blast
- sbmltoolbox
- snakemake
- toil