Change log for hisat2 package in Ubuntu

110 of 10 results
Published in groovy-release on 2020-08-11
Deleted in groovy-proposed (Reason: moved to Release)
hisat2 (2.2.1-1) unstable; urgency=medium

  [ Steffen Moeller ]
  * Team upload.
  * New upstream version
  * debhelper-compat 13 (routine-update)

  [ Michael R. Crusoe ]
  * Refresh the patches

 -- Michael R. Crusoe <email address hidden>  Tue, 11 Aug 2020 13:42:31 +0200

Available diffs

Superseded in groovy-release on 2020-08-11
Deleted in groovy-proposed on 2020-08-13 (Reason: moved to Release)
hisat2 (2.2.0-2) unstable; urgency=medium

  * Fix simde patch for ppc64el
  * Fix missing $(LDFLAGS) in hardening patch

 -- Michael R. Crusoe <email address hidden>  Wed, 06 May 2020 20:48:11 +0200

Available diffs

Superseded in groovy-proposed on 2020-05-06
hisat2 (2.2.0-1) unstable; urgency=medium

  * Use the libsimde-dev package instead of our code copy.
  * Standards-Version: 4.5.0 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Upstream moved to GitHub
  * Use the HISAT2 citation instead of the HISAT paper
  * New upstream version
  * Freshen the patches
  * Added patch to fix the manual path

 -- Michael R. Crusoe <email address hidden>  Sun, 19 Apr 2020 23:04:26 +0200
Superseded in groovy-release on 2020-05-07
Published in focal-release on 2020-02-12
Deleted in focal-proposed (Reason: moved to Release)
hisat2 (2.1.0-4) unstable; urgency=medium

  * Integrate recent changes with the new python3-hisat2 package.
  * Made it easier to cross build the package

 -- Michael R. Crusoe <email address hidden>  Tue, 11 Feb 2020 18:22:17 +0100
Superseded in focal-release on 2020-02-12
Deleted in focal-proposed on 2020-02-13 (Reason: moved to Release)
hisat2 (2.1.0-2nopython3hisat3) unstable; urgency=medium

  * armhf armel ppc64el s390x: add -Wno-narrowing

 -- Michael R. Crusoe <email address hidden>  Sat, 04 Jan 2020 22:52:02 +0100
Superseded in focal-release on 2020-01-05
Deleted in focal-proposed on 2020-01-06 (Reason: moved to Release)
hisat2 (2.1.0-2nopython3hisat2) unstable; urgency=medium

  [ Saira Hussain ]
  * Add autopkgtest

  [ Andreas Tille ]
  * Install hisat2_extract_splice_sites.py
  * Recommends: bcftools, samtools

  [ Michael R. Crusoe ]
  * Skip the new python3-hisat2 package while we wait for 2.1.0-3 to go
    through the NEW queue.
  * Include SIMD everywhere headers and enable building on all architectures.
  * debhelper-compat 12
  * Remove trailing whitespace in debian/control
  * Ported Python scripts to Python 3 using 2to3. Closes: #943125

 -- Michael R. Crusoe <email address hidden>  Mon, 30 Dec 2019 20:08:00 +0100

Available diffs

Superseded in focal-release on 2020-01-05
Published in eoan-release on 2019-04-18
Obsolete in disco-release on 2020-07-14
Deleted in disco-proposed (Reason: moved to release)
hisat2 (2.1.0-2) unstable; urgency=medium

  * Team upload.
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.2.1
  * Fix wrong path for Perl interpreter
  * Do not parse d/changelog

 -- Andreas Tille <email address hidden>  Mon, 24 Sep 2018 11:52:06 +0200

Available diffs

Superseded in disco-release on 2018-11-09
Obsolete in cosmic-release on 2020-07-13
Published in bionic-release on 2017-11-02
Deleted in bionic-proposed (Reason: moved to release)
hisat2 (2.1.0-1) unstable; urgency=medium

  * Team upload

  [ Steffen Moeller ]
  * debian/upstream/metadata: Added ref to OMICtools

  [ Andreas Tille ]
  * New upstream version
  * Standards-Version: 4.1.0 (no changes needed)

 -- Andreas Tille <email address hidden>  Mon, 04 Sep 2017 14:49:40 +0200

Available diffs

Superseded in bionic-release on 2017-11-02
Obsolete in artful-release on 2020-07-10
Obsolete in zesty-release on 2018-06-22
Deleted in zesty-proposed on 2020-07-10 (Reason: moved to release)
hisat2 (2.0.5-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Architecture: amd64 kfreebsd-amd64
    Closes: #834862, #834863
  * d/watch:
     - version=4
     - xz compression
  * debhelper 10

 -- Andreas Tille <email address hidden>  Fri, 09 Dec 2016 13:45:26 +0100

Available diffs

Superseded in zesty-release on 2016-12-10
Deleted in zesty-proposed on 2016-12-11 (Reason: moved to release)
hisat2 (2.0.4-2) unstable; urgency=medium

  * Team upload.
  * Fix Vcs-Git.
  * Fix build on kFreeBSD. Thanks to Steven Chamberlain for the patch.
    Closes: #834864
  * Make build reproducible.
    - Set C(XX,PP)FLAGS to make sure -fdebug-prefix-map is set.
    - Set TZ=UTC.
  * Remove arch-restrictive compiler flags.
    Closes: #834862

 -- Sascha Steinbiss <email address hidden>  Thu, 25 Aug 2016 15:46:42 +0000
110 of 10 results